Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_025424.1
Length=45648
Score E
Sequences producing significant alignments: (Bits) Value
seq20250 228 2e-55
>seq20250
Length=26292
Score = 228 bits (252), Expect = 2e-55
Identities = 258/338 (76%), Gaps = 21/338 (6%)
Strand=Plus/Minus
Query 4592 CTCACTTTCTATTAAAAGGATTATTTTATTAAGTTATGtttttttAA-CTGAAACCAAGT 4650
|||| ||||| |||||| ||||||||| || |||||| ||| |||| | |||| |
Sbjct 8622 CTCATTTTCTGTTAAAAAGATTATTTTGTTCAGTTATTTTTCATTAATCAGAAAAAATTG 8563
Query 4651 CTCCATGCCTCTTACGTCTTTCTCATAAATTGGCATTACATATATCTCTTCGTTTATTAA 4710
||||||| |||||| || |||| ||| |||||||||||| |||||||||| ||| ||||
Sbjct 8562 TTCCATGCTTCTTACATCCTTCTTATACATTGGCATTACAAATATCTCTTCATTTCTTAA 8503
Query 4711 CAGTTGGAATTCTACACATTGTTTTTCTCTGTTCCATCCGTAAGATGCCATAGGAACCAT 4770
|||||||| ||||||||| |||||||| ||||||| |||||| |||||||| || |||
Sbjct 8502 TAGTTGGAACTCTACACATCGTTTTTCTTTGTTCCACCCGTAACATGCCATA-GATACAT 8444
Query 4771 TTTAGGCTCCGCTTTTTCTGTCATTTTCTCTTcccccccTGAAT-AAAACTCAATATTCC 4829
||| || ||| | ||||| || |||| || ||| ||||| |||||| ||||||||
Sbjct 8443 TTTTGGTTCCTTTCTTTCT-TCTATTTCCCTCTACCCTTTGAATAAAAACTTAATATTCC 8385
Query 4830 GTCAATACTGTAGACAACCCATTAAGTTA-CTTTCTCCCAGTTCCCCCTTGGAGAACCAG 4888
|| |||| | | |||| ||| |||| |||||||| | | ||||| |
Sbjct 8384 GTTAATAATATGGACA---CAT--GGTTATCTTTCTCCGATT---CCCTT--------AT 8341
Query 4889 CCGGGCAGTTAGCTTTTGCTAGCTGCTCTTTTAGTTAT 4926
| |||||||||| |||||||||||| ||||| ||||
Sbjct 8340 ATGAGCAGTTAGCTATTGCTAGCTGCTTTTTTACTTAT 8303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 145902127745500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |