Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq24711 89.7 4e-13 seq2313 86.0 5e-12 >seq24711 Length=27656 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || |||||||| || ||||| |||||||| ||||| ||||| ||| | | Sbjct 4652 ATGCAGATCTTTGTTAAGACCTTGACGGGCAAGACTATTACTTTGGAAGTTGAAAGCTCC 4711 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | | ||||| || ||| |||||||| || | || || || Sbjct 4712 GACACTATTGACAATGTGAAGGCCAAGATTCAAGACAAAGAGGGTATTCCTCCGGACCAG 4771 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || || | || | ||| || || || | ||||| | |||| ||| ||||||||| Sbjct 4772 CAGAGATTGATCTTTGCTGGTAAGCAGCTTGAAGACGGCAGAACTTTGGCTGATTACAAC 4831 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || ||||| ||||| || ||||| || ||| | |||| || || Sbjct 4832 ATCCAGAAAGAGTCTACTCTTCATTTGGTGTTGCGTCTACGTGGTGG 4878 >seq2313 Length=70781 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 106353 GACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAA 106412 ||||||||||| | || ||||||||| ||||| |||| ||| || || ||| | ||| Sbjct 4826 GACAAAGAAGGTATACCACCTGATCAACAGAGGCTGATTTTTGCTGGTAAGCAACTTGAA 4767 Query 106413 GATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||| | ||| | | ||||||||||| || ||||| ||||| || ||| | || ||| Sbjct 4766 GATGGTCGAACCTTAGCTGATTACAACATCCAGAAAGAGTCTACTCTTCATCTTGTCTTG 4707 Query 106473 AGGTTACGAGGAGGA 106487 ||| | |||| ||| Sbjct 4706 AGGCTCAGAGGTGGA 4692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402188504895200