Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_026926.1
Length=192108
Score E
Sequences producing significant alignments: (Bits) Value
seq11714 553 2e-152
seq6667 522 3e-143
seq27581 95.1 1e-14
>seq11714
Length=14353
Score = 553 bits (612), Expect = 2e-152
Identities = 693/951 (73%), Gaps = 0/951 (0%)
Strand=Plus/Minus
Query 181023 GGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTATCTGTTTCATCGTC 181082
|| ||||| || || ||||||| || || | ||| | |||||| | ||| || ||
Sbjct 1387 GGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATC 1328
Query 181083 GCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCA 181142
|| ||| | |||||||| || || || || || || || |||||||| || |||| ||
Sbjct 1327 GCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCT 1268
Query 181143 CTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGT 181202
|| | || || ||||| || || || ||||| || |||| |||| || ||||||
Sbjct 1267 CTTCTTTACGGAAACAATATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGT 1208
Query 181203 CTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGT 181262
| || || || || ||||||||||| ||||| ||||||| ||||| || ||||| |||
Sbjct 1207 TTGCATTTTTACCCAATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGCGGT 1148
Query 181263 CCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATTTATGCATACATGGGACGTGAA 181322
|||| |||| | || | ||||| | | || | | || ||||| |||||
Sbjct 1147 CCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAG 1088
Query 181323 TGGGAACTCTCTTACCGCTTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCTCCA 181382
|||||||| || ||| | |||||||| || ||||| ||||||||| || |||||
Sbjct 1087 TGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCT 1028
Query 181383 GTCGCAGCAGCATCTGCTGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGAC 181442
|| ||||| ||| ||||||| ||| | |||| || | |||||||| ||| |||||
Sbjct 1027 GTTGCAGCTGCAACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGAT 968
Query 181443 GCAATGCCACTTGGCATCTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAGCAC 181502
| ||||| || || ||||||||||| ||||||| ||| |||| ||||| || ||||||
Sbjct 967 GGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCAC 908
Query 181503 AACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGTATTTGGTGGTTCACTG 181562
|||||||| ||||| || || |||||||| || || || |||||||| || || || ||
Sbjct 907 AACATTCTTATGCACCCATTTCACATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTA 848
Query 181563 TTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACT 181622
|| ||||| ||||| ||||| ||||| || ||| | || | || || || |||| |
Sbjct 847 TTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAAT 788
Query 181623 GAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCC 181682
|| || || | ||||||| ||||||||||||||||| || || ||||| || ||
Sbjct 787 GAATCTGCTAATGAAGGTTACAGATTCGGACAAGAAGAAGAAACTTATAACATTGTAGCT 728
Query 181683 GCCCACGGTTACTTTGGTCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCA 181742
|| || ||||| ||||| || |||||||| ||||||||| |||||||| || |||||
Sbjct 727 GCTCATGGTTATTTTGGCCGATTGATCTTTCAATATGCTAGTTTCAACAATTCTCGTTCT 668
Query 181743 CTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTA 181802
| || |||||| | || || ||||| ||||| || || ||||| || || | || |
Sbjct 667 TTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATT 608
Query 181803 AGCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCTATCCTCGACGGACAA 181862
||||||||||| || ||||| ||||| ||||| |||||||| || | | || | |||
Sbjct 607 AGCACCATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAA 548
Query 181863 GGACGTGTCCTCAACACCTGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTC 181922
||||| || | || || ||||| || | | |||||||| || || ||||||||
Sbjct 547 GGACGCGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTT 488
Query 181923 ATGCACGAGCGCAACGCGCACAACTTCCCGCTTGATCTTGCAGCAGCTGAG 181973
||||| || || || || ||||||||||| || || || || || | ||||
Sbjct 487 ATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 437
>seq6667
Length=26159
Score = 522 bits (578), Expect = 3e-143
Identities = 721/1006 (72%), Gaps = 6/1006 (1%)
Strand=Plus/Minus
Query 182371 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 182430
|||| |||||| | |||| |||||||| ||||| ||||||||||| || | ||
Sbjct 10114 TGGATGACTGGTTACGGAGGGACCGCTTTGTTTTTGTAGGTTGGTCTGGTCTATTGCTCT 10055
Query 182431 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 182490
|||| ||| ||| |||| | || |||||| | || || ||| | ||||| || |
Sbjct 10054 TTCCTTGTGCCTATTTTGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 9995
Query 182491 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTG 182550
|||| || || || | ||| ||||||| | |||||| || ||| | || || || |
Sbjct 9994 GGTATACTCATGGATTGGCTAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCCG 9935
Query 182551 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 182610
| ||||| |||||| || | | | |||||| | | |||| ||||||||||| | |
Sbjct 9934 TTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTGTGGGGTCCTGAAGCAC 9875
Query 182611 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACG 182670
| || |||| || ||||| ||| | || || || ||| ||| || ||||||||||
Sbjct 9874 AAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGGCTTTTGTTGCTCTCCACG 9815
Query 182671 GTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGCCTGATTGGAA 182730
| || ||||| | || ||||| ||| | | ||||||||||||||||| || |
Sbjct 9814 GCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCCGTTCAAT 9755
Query 182731 TCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTTCC 182790
| | ||||| ||||| || || || |||||||| |||||||| || || ||| ||||
Sbjct 9754 TGCGGCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTCTTCC 9695
Query 182791 TCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCGA 182850
| || ||||| | || || || |||||| || ||||| |||||||| ||||| |
Sbjct 9694 TAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTA 9635
Query 182851 TCTTCAGGTTC---CTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTCC 182907
| || | ||| || || |||| |||||||| | || |||||| | ||||| || |
Sbjct 9634 TATTTCGATTCATCCTCTTTTTCCA--AGGGTTTC-ATAATTGGACATTGAACCCATTTC 9578
Query 182908 ATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTCA 182967
||||||||||||| || ||| ||||||| | || ||||| | ||||| ||||||| |
Sbjct 9577 ATATGATGGGAGTCGCCGGTGTACTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCTA 9518
Query 182968 CAGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGATT 183027
| ||||| ||||| || | ||||||||| || ||||| ||||| || || |
Sbjct 9517 CTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACC 9458
Query 183028 CCACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATCT 183087
| ||||| | || || || ||||| ||||| || || || |||||||||||||||||||
Sbjct 9457 CAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGTTTTTGGTCACAAATCT 9398
Query 183088 TCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCA 183147
| |||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || |
Sbjct 9397 TTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAA 9338
Query 183148 TGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTATG 183207
||| | ||| | | || |||| | | || || ||| | || || ||||| ||||
Sbjct 9337 CTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCTTTGAACCTACGTGCCTATG 9278
Query 183208 ATTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACAA 183267
| || || || || || | ||||| |||||||| || || ||||| ||||| || |
Sbjct 9277 ACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTATACTA 9218
Query 183268 AGAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACATG 183327
| || || ||| | || ||||| | ||||||||| |||| || ||||| || ||||
Sbjct 9217 AAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATG 9158
Query 183328 AAAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373
||||| | || |||||||| || |||||||| | || ||||| ||
Sbjct 9157 AAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 9112
>seq27581
Length=27377
Score = 95.1 bits (104), Expect = 1e-14
Identities = 126/175 (72%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 179483 TCCTTGACGCTGCTGAAGAAGCAGGTGTAGATATCAATTACTCTTGTCGTGCTGGTGCTT 179542
|||| ||||| |||||||||||||| | ||| | ||||||||| ||||||||| | |
Sbjct 7460 TCCTCGACGCAGCTGAAGAAGCAGGAATCGATTTGCCTTACTCTTGCCGTGCTGGTTCAT 7401
Query 179543 GTTCATCTTGTGCTGGTAAATTAGAGAGTGGATCTGTTGATCAAAGCGATCAATCGTTTT 179602
|||| ||||| |||||| | || ||||||||| |||||| || || ||
Sbjct 7400 GTTCTAGCTGTGCAGGTAAAGTTAAGTCTGGATCTGTCGATCAATCAGACCAGAGTTTCC 7341
Query 179603 TGGATGACGATCAAATGGAGTCGGGATTTATTCTGACTTGCGTATCTTATCCTAC 179657
| ||||| || || || | |||||| |||| ||||| | ||||||||||
Sbjct 7340 TCGATGATGAACAGATTGCTGAAGGATTTGTTCTCACTTGTGCTGCTTATCCTAC 7286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 614396529732000
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