Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq13163 89.7 4e-13 >seq13163 Length=108863 Score = 89.7 bits (98), Expect = 4e-13 Identities = 168/242 (69%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 40925 TATGTACTCTGATTATACCAATAAAGGAATGGATCAATTA-CAGTGCGTTATAGATACGA 40983 |||| | |||||||||| | ||||| | |||||| | ||| || || || | || Sbjct 36465 TATGCATGCTGATTATACTGGTCAAGGATTTGATCAACTCGCAGAT-GTAATCGACAAGA 36523 Query 40984 TTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTAC 41043 | ||| | |||| ||| || || || ||||| | || ||||| || | || | Sbjct 36524 TCAAAAACAATCCTGATGATCGGCGCATTATATTATCGGCTTGGAATCCTTCTGATCTTA 36583 Query 41044 ATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCA-ATGGTGAA 41102 | ||||||||| | || || || || |||| ||||| || ||| ||| | || || Sbjct 36584 AGTTGATGGCACTTCCTCCATGCCACATGTTTGCACAGTTCTATGTT-GCAGAAGGGGAG 36642 Query 41103 CTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATA 41162 || ||||||||| ||||||| | |||| || ||||| || || || ||||||||||| Sbjct 36643 CTCTCATGTCAAATGTATCAGCGTTCAGCGGATATGGGTCTTGGTGTGCCGTTTAACATT 36702 Query 41163 GC 41164 || Sbjct 36703 GC 36704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397316614043875