Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq13163 89.7 4e-13
>seq13163
Length=108863
Score = 89.7 bits (98), Expect = 4e-13
Identities = 168/242 (69%), Gaps = 4/242 (2%)
Strand=Plus/Plus
Query 40925 TATGTACTCTGATTATACCAATAAAGGAATGGATCAATTA-CAGTGCGTTATAGATACGA 40983
|||| | |||||||||| | ||||| | |||||| | ||| || || || | ||
Sbjct 36465 TATGCATGCTGATTATACTGGTCAAGGATTTGATCAACTCGCAGAT-GTAATCGACAAGA 36523
Query 40984 TTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTAC 41043
| ||| | |||| ||| || || || ||||| | || ||||| || | || |
Sbjct 36524 TCAAAAACAATCCTGATGATCGGCGCATTATATTATCGGCTTGGAATCCTTCTGATCTTA 36583
Query 41044 ATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCA-ATGGTGAA 41102
| ||||||||| | || || || || |||| ||||| || ||| ||| | || ||
Sbjct 36584 AGTTGATGGCACTTCCTCCATGCCACATGTTTGCACAGTTCTATGTT-GCAGAAGGGGAG 36642
Query 41103 CTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATA 41162
|| ||||||||| ||||||| | |||| || ||||| || || || |||||||||||
Sbjct 36643 CTCTCATGTCAAATGTATCAGCGTTCAGCGGATATGGGTCTTGGTGTGCCGTTTAACATT 36702
Query 41163 GC 41164
||
Sbjct 36703 GC 36704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397316614043875
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |