Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq18099 107 2e-18
seq13097 87.8 2e-12
>seq18099
Length=159039
Score = 107 bits (118), Expect = 2e-18
Identities = 112/147 (76%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086
||| ||||| ||||| | ||||| | || || ||||| | ||| |||||||| ||
Sbjct 20638 GTGAAGACCTTCGTCTCTTGAGATTAACTCGTTAGAGAAAGTTAAACCAGGCATGAGTCC 20579
Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146
|| ||||| | ||||||||||| ||| || || ||||||||||| || || || |||||
Sbjct 20578 ACGTTTCTTAAGCCAGAAAATCGAACAGAAGGAACCAGAGAAGAATATACCTTCAACACA 20519
Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAA 130173
|||||||| | || ||| ||||| ||
Sbjct 20518 AGCGAACGCTACGATACGTTCAGCGAA 20492
>seq13097
Length=20508
Score = 87.8 bits (96), Expect = 2e-12
Identities = 96/126 (76%), Gaps = 4/126 (3%)
Strand=Plus/Plus
Query 14152 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGG 14211
||| |||||||||||||||||||| ||||| || || ||||| | |||||||| ||
Sbjct 15587 AAAACCATCCATCTCAGTCAAGAGCTGATTAATCGTCTGTTCTCTCTCATCATTTCCA-- 15644
Query 14212 CATACC--ACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATA 14269
| | || ||| || | | ||| |||| || || ||||| ||||| |||||||| |||
Sbjct 15645 CCTCCCATACCAGCTCCTCTCTGCCTACCAACAGCATCAATCTCATCAATGAAAACAATA 15704
Query 14270 CATGGT 14275
|| |||
Sbjct 15705 CAAGGT 15710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618212756589000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |