Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_028748.2 Length=51366 Score E Sequences producing significant alignments: (Bits) Value seq20250 313 8e-81 >seq20250 Length=26292 Score = 313 bits (346), Expect = 8e-81 Identities = 270/326 (83%), Gaps = 14/326 (4%) Strand=Plus/Plus Query 42122 TAAAAGAGCAGCTAGCAAAAGCTAACTGCTCATCTCCAAGGGGGAACAAGGAGAAAG-TA 42180 ||||| |||||||||||| |||||||||||||| | | ||| | | |||||||| || Sbjct 8308 TAAAAAAGCAGCTAGCAATAGCTAACTGCTCATAT---AAGGGAATC--GGAGAAAGATA 8362 Query 42181 ACTTAATGGGTTGTCTACAGTATTGACGGAATATTGAGTTTT-ATTCAGGAGG-AGAGAG 42238 || ||| |||| | | |||| |||||||||| |||||| ||||| || |||| | Sbjct 8363 ACC--ATG---TGTCCATATTATTAACGGAATATTAAGTTTTTATTCAAAGGGTAGAGGG 8417 Query 42239 AAATGGAAGaaaaaaaGGAACCTAAAATGGTATCTATGGCATGTTTCGGGTGGAATAAAG 42298 |||| ||||||| ||||||||| |||||| ||||||||||||||| ||||||||| |||| Sbjct 8418 AAATAGAAGAAAGAAAGGAACCAAAAATG-TATCTATGGCATGTTACGGGTGGAACAAAG 8476 Query 42299 AAAAACAATGCGTAGAGTTCCAACTGTTAATAAATGAAGAGATATATGTAATGCCAGTGT 42358 |||||| ||| |||||||||||||| |||| |||||||||||||| |||||||||| ||| Sbjct 8477 AAAAACGATGTGTAGAGTTCCAACTATTAAGAAATGAAGAGATATTTGTAATGCCAATGT 8536 Query 42359 CTAAGAGGGATGTACACGGCATGGAAACATTTTTCCTGGTTAATGAAAAATAACTGAACA 42418 ||||| ||||||| |||||||| |||||| ||| ||||||||||||||||||||| Sbjct 8537 ATAAGAAGGATGTAAGAAGCATGGAACAATTTTTTCTGATTAATGAAAAATAACTGAACA 8596 Query 42419 AAATAATCCTTTGGATAGAAAGTGAG 42444 |||||||| ||| | ||||| |||| Sbjct 8597 AAATAATCTTTTTAACAGAAAATGAG 8622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164193475398400