Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq2366 87.8 1e-12 >seq2366 Length=14026 Score = 87.8 bits (96), Expect = 1e-12 Identities = 155/222 (70%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 29723 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGC 29782 |||||||| | ||| |||| || |||||||| ||| |||||||| || || ||||| Sbjct 9555 ACGTGAGCGAGAATGCACGTAAGAAGAGAGTATGAGGCAATGTTAAATGGTACACCGAGA 9614 Query 29783 CCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGT-CGCTCACGTAAAA 29841 ||||| || |||| | ||| || | || || || || ||||| | ||| || ||||| Sbjct 9615 CCCATATCGGCTGAGCGCTGATACATTTGACATGAAAGTTCTCCATTCGCA-ACATAAAA 9673 Query 29842 CTG---ACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCA 29898 ||| | ||| | ||||| |||||||||||||| || | || || ||||| Sbjct 9674 CTGTGAAAACAAG---TGGCATGGAGGAAGGGCCATCAGTTTAAGATCAGGAGGATTCCA 9730 Query 29899 GGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT 29940 || ||| || || || | || || || |||||| |||| Sbjct 9731 AGCCGACATTATAATCCGTCGATCATCAGGATTGTTCTTGAT 9772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406020760469650