Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq16226 127 1e-24
seq4225 125 5e-24
seq7697 120 2e-22
seq5576 120 2e-22
seq24711 118 8e-22
seq27144 114 9e-21
seq14351 113 3e-20
seq17640 109 4e-19
seq18065 95.1 9e-15
seq18044 93.3 3e-14
seq8442 89.7 4e-13
>seq16226
Length=39664
Score = 127 bits (140), Expect = 1e-24
Identities = 169/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || | |||||||| ||| || || |||||| ||||||||||| ||
Sbjct 11590 CATACCACCACGAAGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 11649
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || || | || || ||||||||||||||||||||||| | |||||| || |
Sbjct 11650 TGCAAGAGTACGACCATCCTCAAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCCGG 11709
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
||| | ||| || || || ||||| |||| | ||| | |||||||| | | |
Sbjct 11710 AGGAATACCCTCTTTGTCTTGAATCTT-GGCTTTCACGTTGTCGATGGTGTCTGAGCTCT 11768
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||| | ||||| ||||| || || | ||||||||||||||| |||||
Sbjct 11769 CAACCTCGAGAGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 11820
Score = 118 bits (130), Expect = 8e-22
Identities = 154/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || || |||||| ||||||||||| || || | ||| | || ||
Sbjct 10928 ACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCCTCA 10987
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||| | ||||||||| || | ||| | ||||||||| |||
Sbjct 10988 AGCTGCTTTCCAGCGAAGATTAGACGCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGG 11047
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | || ||||| | | || ||||| | ||||| ||||
Sbjct 11048 ATCTTGGCCTTGACATTGT--CAATTGTGTCCGAGCTCTCAACCTCAAGGGTAATGGTCT 11105
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| ||||| ||||||||||| || |||||
Sbjct 11106 TTCCGGTGAGAGTCTTCACGAAAATCTGCAT 11136
Score = 114 bits (126), Expect = 9e-21
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || | ||| |||| |||||| || |||||| || |||||||| ||
Sbjct 11134 CATACCACCACGAAGACGCAAGACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTC 11193
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
||| | || | || || |||||||| || ||||| || | ||||||||| || |
Sbjct 11194 GGCTAAGGTACGACCATCCTCAAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGGTCCGG 11253
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | |||||| || ||| ||||| ||| | | | || ||||| | | ||
Sbjct 11254 AGGGATACCTTCTTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCTGAGCTCTC 11313
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | ||||| ||||| || || | |||||||||||||||||||||
Sbjct 11314 AACCTCAAGGGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATTTGCAT 11364
Score = 107 bits (118), Expect = 1e-18
Identities = 164/234 (70%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | || | |||||||| |||||| ||| |||||| |||||||||||
Sbjct 11359 TTGCATACCTCCACGTAGACGCAACACCAAGTGAAGTGTGGACTCCTTCTGGATGTTGTA 11418
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| || || ||| | || || |||||||| || || |||||||| | ||||| ||
Sbjct 11419 GTCAGCAAGAGTGCGACCATCTTCAAGCTGCTTTCCAGCGAAGATCAACCTTTGCTGGTC 11478
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
| || | || ||||| || || || ||| | | | |||||||| | |
Sbjct 11479 CGGTGGGATTCCCTCCTTGTCTTGGATTTTGGCCTTGACGTTGTCGATGGTGTCTGAGCT 11538
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| | ||||| ||||| || || | |||||| || ||||| |||||
Sbjct 11539 CTCCACCTCGAGGGTAATAGTCTTACCAGTTAAGGTCTTGACAAAGATCTGCAT 11592
Score = 96.9 bits (106), Expect = 2e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||||| | || || ||||| || |||||| ||||||||||||||
Sbjct 12046 CATACCTCCACGAAGTCTGAGGACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATC 12105
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || || | || || || ||||| || || || ||||| | ||||||||| |
Sbjct 12106 CGCAAGAGTACGACCATCCTCAAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGATCCGG 12165
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
||| | || ||||| || ||||| || | || ||| | |||||||| | |
Sbjct 12166 AGGAATTCCCTCCTTATCTTGGATCTT-AGCCTTAACGTTGTCAATGGTGTCAGAACTCT 12224
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||| | ||||| ||||| || || | |||||| || ||||| |||||
Sbjct 12225 CAACCTCGAGGGTAATAGTCTTACCAGTCAAGGTCTTAACAAAGATCTGCAT 12276
>seq4225
Length=52512
Score = 125 bits (138), Expect = 5e-24
Identities = 168/231 (73%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169
||| ||||| | || | |||| |||||||| || || |||||||||||||| ||
Sbjct 2734 TCCTCCTCTTAATCGTAGAACCAAATGAAGCGTTGATTCTTTCTGGATGTTGTAATCAGC 2793
Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
|||| | |||| || | || || ||||||||||||||||| ||||| || | ||
Sbjct 2794 GAGTGTTCTTCCGTCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCCGGTGG 2853
Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTC 44286
| |||||||| || |||||| |||| || ||| | || ||||| | |||||
Sbjct 2854 AATTCCTTCCTTGTCTTGAATCTTC-GCTTTCACATTGT--CGATTGTGTCCGAAGATTC 2910
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || || ||||| ||||| ||||| ||||||||||| |||||
Sbjct 2911 AACCTCTAGGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 2961
>seq7697
Length=17472
Score = 120 bits (132), Expect = 2e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || | | ||||| ||| || || ||| |||||||||||||| ||
Sbjct 10417 CATACCACCTCTGAGACGAAGCACCAAGTGGAGAGTAGACTCTTTTTGGATGTTGTAGTC 10476
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|||||| ||| | || || |||||||||||||||||||| | | ||||||||| |
Sbjct 10477 TGCGAGTGTGCGACCATCCTCTAGCTGCTTCCCGGCAAAGATAAGTCTCTGCTGATCCGG 10536
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || || || || || || ||| | | | || ||||| | | ||
Sbjct 10537 TGGGATTCCCTCTTTGTCTTGGATTTTGGCCTTGACATTATCGATTGTGTCTGAGCTCTC 10596
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| || || || || || |||||||||||||| ||||| |||||
Sbjct 10597 CACCTCCAAAGTGATTGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 10647
Score = 114 bits (126), Expect = 9e-21
Identities = 170/236 (72%), Gaps = 10/236 (4%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || | ||| || ||||| || ||| ||| || ||||||||||||||
Sbjct 10645 CATACCACCACGAAGACGCAAGACAAGGTGGAGAGTGGACTCTTTCTGGATGTTGTAATC 10704
Query 44167 GGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
|| ||||| | | | || || || ||||| || || ||||| | | ||||||||||
Sbjct 10705 CGCAAGAGTT--CTCCCATCTTCAAGTTGCTTACCAGCGAAGATAAGCCTCTGCTGATCT 10762
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCG 44281
| ||| | ||||||||| || ||||| |||| || ||| | || ||||||| |
Sbjct 10763 GGAGGAATACCTTCCTTGTCTTGGATCTT-AGCTTTCACATTGT--CAATAGTGTCGGAG 10819
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| | ||||| ||||| || || | |||||||| ||||| |||||
Sbjct 10820 CTCTCCACCTCAAGAGTAATGGTCTTGCCGGTCAAAGTCTTCACAAAGATCTGCAT 10875
Score = 107 bits (118), Expect = 1e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||||| || ||||| |||||||||||||| || || | | || ||
Sbjct 9983 ACCAAATGAAGAGTCGATTCCTTCTGGATGTTGTAATCCGCAAGAGTCCTTCCATCTTCA 10042
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || || ||||| | | ||||||||| | ||| | |||||||| |||
Sbjct 10043 AGTTGCTTACCTGCGAAGATAAGTCTCTGCTGATCCGGAGGAATCCCTTCCTTGTCCTGG 10102
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | |||| ||||| | | |||||||| | ||||| || ||
Sbjct 10103 ATCTTAGCCTTCACATTGTCTATTGTGTCTGAGCTCTCCACCTCAAGGGTAATGGTTTTA 10162
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||||||||||||| || |||||
Sbjct 10163 CCAGTGAGGGTCTTCACGAATATCTGCAT 10191
Score = 95.1 bits (104), Expect = 9e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| || || || || |||||| |||||||| || || || || ||| |||| ||
Sbjct 10210 CACAAGATGGAGTGTAGACTCCTTCTGGATGTTATAGTCTGCTAGGGTGCGTCCGTCTTC 10269
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||||||||| | | |||||| |||| || | || || || |||
Sbjct 10270 TAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATTCCCTCTTTGTCCTG 10329
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | || ||||| | | |||||||||| || || || ||
Sbjct 10330 AATCTTAGCCTTGACGTTATCAATAGTGTCAGAGCTCTCCACCTCCAAAGTGATTGTTTT 10389
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||||||||| || || |||||
Sbjct 10390 ACCGGTAAGGGTCTTCACAAAAATCTGCAT 10419
>seq5576
Length=16168
Score = 120 bits (132), Expect = 2e-22
Identities = 167/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| | || |||| ||| || || ||||||||||||||||||
Sbjct 1248 TTGCATACCTCCTCTCAAACGCAGAACCAAGTGGAGAGTTGACTCCTTTTGGATGTTGTA 1307
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| || | || |||| || ||||| || ||||||||||| | | || || ||
Sbjct 1308 ATCAGCCAAGGTACGGCCGTCCTCGAGCTGTTTACCGGCAAAGATAAGCCTTTGTTGGTC 1367
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
| ||| | ||||| || || ||||| ||| | || ||| |||||||| |
Sbjct 1368 CGGAGGGATTCCTTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCTACGGTGTCGGAGCT 1427
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| ||||| | || || ||||| ||||| || || |||||||||||||||||
Sbjct 1428 TTCGACCTCAAGTGTTATGGTCTTGCCCGTAAGAGTTTTCACGAAGATTTGCAT 1481
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| || ||||||||||| |||||||| || || || | || ||
Sbjct 1045 ACAAGGTGAAGTGTTGATTCCTTTTGGATATTGTAATCCGCAAGAGTACGGCCATCCTCT 1104
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || ||||||||||| | | ||| || || | ||| | ||||| || ||
Sbjct 1105 AGCTGTTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGGATTCCTTCTTTATCTTGA 1164
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||| | | ||| ||||| | || || || ||
Sbjct 1165 ATCTTGGCCTTGACGTTGTCAATGGTGTCTGAGCTTTCGACCTCGAGTGTTATGGTTTTG 1224
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||| ||||| |||||||||||
Sbjct 1225 CCAGTTAGGGTTTTCACAAAGATTTGCAT 1253
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| |||||||| || |||||||||||| |||||||| || || ||| | || ||
Sbjct 816 CACAAGGTGAAGTGTAGACTCCTTTTGGATATTGTAATCCGCAAGAGTGCGACCATCCTC 875
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||| || || || ||||||| | ||| || || | || | |||||||| ||
Sbjct 876 GAGCTGTTTACCAGCGAAGATCAGTCTCTGTTGGTCCGGAGTGATCCCTTCCTTGTCTTG 935
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | |||||||| | | || || || | ||||| || ||
Sbjct 936 AATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCAACTTCTAAGGTAATGGTTTT 995
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||| ||||| |||||||||||
Sbjct 996 GCCAGTTAAGGTTTTCACAAAGATTTGCAT 1025
>seq24711
Length=27656
Score = 118 bits (130), Expect = 8e-22
Identities = 170/236 (72%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | || | |||||||| ||||| || ||| || |||||||||||
Sbjct 4885 TTGCATACCACCACGTAGACGCAACACCAAATGAAGAGTAGACTCTTTCTGGATGTTGTA 4826
Query 44164 ATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
||| || | ||| || |||| || |||||||| || ||||||||||| | ||||||
Sbjct 4825 ATCAGCCAAAGTTCT-GC-CGTCTTCAAGCTGCTTACCAGCAAAGATCAATCTCTGCTGG 4768
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281
|| | ||| | ||| || || || ||||| ||||| | | || ||||||| |
Sbjct 4767 TCCGGAGGAATACCCTCTTTGTCTTGAATCTTGGCCTTCACATTGTCAATAGTGTCGGAG 4708
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || |||| ||||| ||||| ||||| | |||||| || ||||| |||||
Sbjct 4707 CTTTCAACTTCCAAAGTAATAGTCTTGCCCGTCAAGGTCTTAACAAAGATCTGCAT 4652
Score = 114 bits (126), Expect = 9e-21
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || | |||||||| ||| | || |||||||||||| ||||| ||
Sbjct 5110 CATACCACCACGAAGACGCAACACCAAGTGCAATGTAGACTCCTTTTGGATATTGTAGTC 5051
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| | || | || || |||||||| |||||||||||||| | |||||| || |
Sbjct 5050 AGCCAAGGTACGACCATCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGG 4991
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | ||||||||| || ||||| ||||| | | || ||||| | ||
Sbjct 4990 TGGAATACCTTCCTTATCTTGGATCTTTGCCTTCACGTTGTCAATAGTGTCAGAACTCTC 4931
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| | ||||| ||||| || || | |||||| ||||||||||||||
Sbjct 4930 CACCTCGAGGGTAATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 4880
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || || ||| || || ||||||||||| || ||| || | || ||
Sbjct 5544 ACCAAGTGGAGGGTTGACTCTTTCTGAATGTTGTAATCCGCCAGTGTACGACCATCCTCA 5485
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||| | ||||||||| || | || | ||||||||| |||
Sbjct 5484 AGCTGCTTACCAGCGAAGATTAGACGCTGCTGGTCCGGTGGAATACCTTCCTTATCCTGG 5425
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | || || || | | || || || | || || |||||
Sbjct 5424 ATCTTGGCCTTCACGTTATCAATAGTATCAGAGCTCTCAACTTCAAGTGTGATTGTCTTG 5365
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || ||||||||||| || |||||
Sbjct 5364 CCAGTAAGAGTCTTCACGAAAATCTGCAT 5336
>seq27144
Length=112545
Score = 114 bits (126), Expect = 9e-21
Identities = 153/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| || ||||| ||||||||||| || ||||| || |||| ||
Sbjct 90290 ACAAGGTGAAGTGTTGATTCCTTCTGGATGTTGTAGTCAGCGAGAGTACGTCCGTCTTCG 90349
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| || || ||||| ||||| || || || ||||| | || | |||||||| ||
Sbjct 90350 AGTTGTTTTCCGGCGAAGATTAATCGTTGTTGATCCGGTGGGATTCCTTCCTTGTCTTGG 90409
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | |||||||| | ||||| ||||| | || |||||||
Sbjct 90410 ATCTTGGCCTTGACATTGT--CGATGGTGTCCGATGATTCAACCTCGAGAGTGATCGTCT 90467
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || ||||| ||||||||||| |||||
Sbjct 90468 TCCCTGTTAGGGTTTTCACGAAGATCTGCAT 90498
>seq14351
Length=15190
Score = 113 bits (124), Expect = 3e-20
Identities = 166/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || | | |||| ||| || || |||||| ||||||||||||||
Sbjct 4166 CATACCACCTCTGAGACGAAGGACCAAGTGGAGTGTTGACTCCTTCTGGATGTTGTAATC 4107
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || || | || || ||||| || |||||||||||||| | |||||| || |
Sbjct 4106 AGCAAGAGTACGGCCATCCTCGAGCTGTTTACCGGCAAAGATCAACCTCTGCTGGTCCGG 4047
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
||| | ||||| || || ||||| ||| || ||| | || ||||||| | |
Sbjct 4046 AGGGATTCCTTCTTTATCTTGAATCTTAGCCTTGACACTGT--CAATTGTGTCGGAGCTT 3989
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | || || ||||| || || || ||||| || |||||||||||
Sbjct 3988 TCGACCTCAAGAGTTATGGTCTTGCCTGTAAGAGTCTTTACAAAGATTTGCAT 3936
Score = 105 bits (116), Expect = 5e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||||| || | |||| || || || |||||| ||||||||||||||
Sbjct 4394 CATACCTCCTCTCAACCTGAGAACCAAATGGAGAGTTGACTCCTTCTGGATGTTGTAATC 4335
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || || | || ||||||||||| || ||||||||||| | ||||| || |
Sbjct 4334 CGCTAGAGTACGACCATCTTCCAGCTGCTTACCAGCAAAGATCAACCTTTGCTGGTCCGG 4275
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | |||||||| || ||||| ||| | | | |||||||| | |||
Sbjct 4274 AGGAATTCCTTCCTTATCTTGGATCTTGGCCTTGACGTTATCAATGGTGTCTGAACTTTC 4215
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || || ||||| || || || ||||| || ||||| |||||
Sbjct 4214 GACCTCAAGGGTTATGGTCTTACCAGTAAGAGTCTTGACAAAGATCTGCAT 4164
>seq17640
Length=82317
Score = 109 bits (120), Expect = 4e-19
Identities = 153/212 (72%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || |||||||| ||||| ||||||||||| || ||||| || |||| ||
Sbjct 53354 ACAAGATGAAGCGTTGATTCCTTCTGGATGTTGTAGTCAGCGAGAGTACGTCCGTCTTCG 53295
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| || || || || ||||| ||||| ||||| || | || | |||||||| ||
Sbjct 53294 AGTTGTTTTCCAGCGAAGATTAAACGTTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGG 53235
Query 44249 ATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| |||| || ||| | ||||| || | ||||| ||||| | || || |||
Sbjct 53234 ATCTT-GGCTTTGACATTGT--CGATGGTATCAGATGATTCAACCTCGAGAGTGATTGTC 53178
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| ||||||||||| |||||
Sbjct 53177 TTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 53146
>seq18065
Length=21122
Score = 95.1 bits (104), Expect = 9e-15
Identities = 162/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||||| || | |||| || || || |||||| ||||||||||| ||
Sbjct 12409 CATACCACCTCTCAACCTGAGAACCAAATGGAGAGTTGACTCCTTCTGGATGTTGTAGTC 12350
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || || | || || || || || ||||||||||| | | ||| ||||| |
Sbjct 12349 TGCAAGAGTACGGCCATCTTCAAGTTGTTTTCCGGCAAAGATGAGCCTCTGTTGATCCGG 12290
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
| | | |||||||| || ||||| ||| || ||| |||| ||||||| | |
Sbjct 12289 ATGGATTCCTTCCTTGTCTTGAATCTTTGCCTTTACATTGT--CTATTGTGTCGGAGCTT 12232
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || | || || ||||| || || || ||||| || |||||||||||
Sbjct 12231 TCAACGTCAAGTGTTATGGTCTTGCCTGTAAGAGTCTTTACAAAGATTTGCAT 12179
>seq18044
Length=6213
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||||||| ||| || ||||| || ||||| ||||||||||||||
Sbjct 3302 CATCCCACCACGGAGTCTCAGCACGAGATGAAGGGTTGATTCCTTCTGGATGTTGTAATC 3361
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| | || | || || ||||| || || ||||| |||| | |||||| || |
Sbjct 3362 AGCCAAGGTACGGCCATCCTCAAGCTGTTTACCAGCAAAAATCAGTCTCTGCTGGTCCGG 3421
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | |||||||| || ||||| ||| | | | |||||||| | |||
Sbjct 3422 AGGGATTCCTTCCTTATCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCTGAACTTTC 3481
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || || ||||| || || || ||||| || ||||| |||||
Sbjct 3482 GACCTCAAGGGTTATGGTCTTGCCAGTAAGAGTCTTAACAAAGATCTGCAT 3532
Score = 82.4 bits (90), Expect = 5e-11
Identities = 159/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||||| || | |||| || || || ||||| || |||||||||||
Sbjct 3074 CATACCACCTCTCAACCTGAGAACCAAATGCAGGGTTGATTCCTTCTGAATGTTGTAATC 3133
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || || | || || ||||| || ||||||||||||| | |||||| || |
Sbjct 3134 TGCAAGGGTTCGACCATCCTCGAGCTGTTTACCGGCAAAGATCAGCCTCTGCTGGTCCGG 3193
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
||| | |||||||| | | | | || |||| || || | |||||||| | | |
Sbjct 3194 AGGGATTCCTTCCTTGT-CTTGAATTTTAGCTTTAACATTGTCAATGGTGTCTGAGCTCT 3252
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || | ||||| || || || || || ||||| || || || |||||
Sbjct 3253 CGACTTCTAGGGTAATTGTTTTACCAGTAAGAGTCTTGACAAATATCTGCAT 3304
>seq8442
Length=60656
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || |||||| |||||||||||||| || || || |||| ||
Sbjct 44051 ACAAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATCCGCAAGAGTACGACCGTCCTCG 44110
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || ||||||||||| | | ||||| || | || | ||||| || ||
Sbjct 44111 AGCTGTTTACCGGCAAAGATGAGCCTCTGCTCGTCCGGAGAAATTCCTTCTTTATCTTGG 44170
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | || ||||||| | ||| || || | || || |||||
Sbjct 44171 ATCTTGGTCTTGATATTGTCAATTGTGTCGGAGCTTTCGACTTCAAGGGTTATGGTCTTG 44230
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || ||||| || |||||||||||
Sbjct 44231 CCTGTAAGAGTCTTAACAAAGATTTGCAT 44259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359864153054175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |