Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq255492 91.5 1e-13
seq34509 91.5 1e-13
>seq255492
Length=11799
Score = 91.5 bits (100), Expect = 1e-13
Identities = 122/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 97072 TGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATC 97131
|||||||| || | | || |||| || |||||||| | |||| || || ||||
Sbjct 6466 TGAGCATCCCCAATAACATGGGTAAAATCACCAGGAACAAGATCACACACGTGAGCGAGT 6525
Query 97132 ATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCT 97191
|| ||||| | ||||| ||| |||||||||||| ||||| || || ||||| || |||
Sbjct 6526 ATGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGCACACCAAGACCCATGTCCGCT 6585
Query 97192 GATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTG 97241
|| | ||||| | ||||| || |||| || || ||||| |||||
Sbjct 6586 GAACGCTGATACATTTGACATGAGAGCTCCCCTTCTGCTACATAGAACTG 6635
>seq34509
Length=4973
Score = 91.5 bits (100), Expect = 1e-13
Identities = 122/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 97072 TGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATC 97131
||| |||| || | | || ||||| || |||||||| | |||| || || ||||
Sbjct 2536 TGACCATCCCCAATAACATGGATAAAATCACCAGGAACAAGATCACACACGTGAGCGAGT 2477
Query 97132 ATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCT 97191
|| ||||| | ||||| ||| ||||||||||| ||||| || || ||||| || |||
Sbjct 2476 ATGCAAGTAAGAAGAGAGTAGGACGCAATGTTAAACGGCACACCAAGACCCATGTCTGCT 2417
Query 97192 GATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTG 97241
|| | ||||| | ||||| || |||| || || |||||| |||||
Sbjct 2416 GAACGCTGATACATTTGACATGAGAGCTCCCCGTCTGCCACATAGAACTG 2367
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 345654579563960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |