Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq255492 91.5 1e-13 seq34509 91.5 1e-13 >seq255492 Length=11799 Score = 91.5 bits (100), Expect = 1e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 97072 TGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATC 97131 |||||||| || | | || |||| || |||||||| | |||| || || |||| Sbjct 6466 TGAGCATCCCCAATAACATGGGTAAAATCACCAGGAACAAGATCACACACGTGAGCGAGT 6525 Query 97132 ATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCT 97191 || ||||| | ||||| ||| |||||||||||| ||||| || || ||||| || ||| Sbjct 6526 ATGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGCACACCAAGACCCATGTCCGCT 6585 Query 97192 GATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTG 97241 || | ||||| | ||||| || |||| || || ||||| ||||| Sbjct 6586 GAACGCTGATACATTTGACATGAGAGCTCCCCTTCTGCTACATAGAACTG 6635 >seq34509 Length=4973 Score = 91.5 bits (100), Expect = 1e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 97072 TGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATC 97131 ||| |||| || | | || ||||| || |||||||| | |||| || || |||| Sbjct 2536 TGACCATCCCCAATAACATGGATAAAATCACCAGGAACAAGATCACACACGTGAGCGAGT 2477 Query 97132 ATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCT 97191 || ||||| | ||||| ||| ||||||||||| ||||| || || ||||| || ||| Sbjct 2476 ATGCAAGTAAGAAGAGAGTAGGACGCAATGTTAAACGGCACACCAAGACCCATGTCTGCT 2417 Query 97192 GATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTG 97241 || | ||||| | ||||| || |||| || || |||||| ||||| Sbjct 2416 GAACGCTGATACATTTGACATGAGAGCTCCCCGTCTGCCACATAGAACTG 2367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345654579563960