Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq153189 116 4e-21 seq26661 107 2e-18 seq210337 104 3e-17 seq84055 104 3e-17 seq117562 100 3e-16 seq214945 95.1 1e-14 seq54724 93.3 5e-14 >seq153189 Length=17048 Score = 116 bits (128), Expect = 4e-21 Identities = 160/220 (73%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| |||||||| ||||| || |||||||||||| |||||||| || || || || | Sbjct 14952 ACGTAACACCAAGTGCAAAGTTGACTCCTTTTGAATGTTGTAATCCGCAAGTGTGCGACC 14893 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||| ||||||||||| ||||| ||||||||||| | || | | ||||| Sbjct 14892 ATCCTCGAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATCCCTTCCTT 14833 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| ||| || |||| ||| | | | ||||| |||| || || || | | Sbjct 14832 GTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCAGAGCTC---TCGACTTCAAGGG 14777 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || ||||| || || ||||| || || || ||||| Sbjct 14776 TGATTGTCTTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 14737 Score = 111 bits (122), Expect = 2e-19 Identities = 159/220 (72%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| |||||||| ||||| || |||||||||||| |||||||| || || || || | Sbjct 14724 ACGTAACACCAAGTGCAAAGTTGACTCCTTTTGAATGTTGTAATCCGCAAGTGTGCGACC 14665 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||| ||||||||||| ||||| ||||||||||| | || | | ||||| Sbjct 14664 ATCCTCGAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATCCCTTCCTT 14605 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| ||| || |||| ||| | | | ||||| |||| ||||| |||| | Sbjct 14604 GTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCTGAGCTC---TCCACCTCGAGGG 14549 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || || || || | || || || ||||| ||||| Sbjct 14548 TAATAGTCTTACCAGTCAAGGTTTTGACGAAGATCTGCAT 14509 Score = 86.0 bits (94), Expect = 7e-12 Identities = 151/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||||||||| || | || |||||| ||||| ||||| || |||| || || | Sbjct 14496 ACGCAACACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGCCAAGGTGCGTCC 14437 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || | ||||| || ||||| || | || |||||| || | || | | ||||| Sbjct 14436 ATCTTCCAATTGCTTTCCGGCGAAGATCAATCTCTGCTGATCCGGAGGAATACCTTCCTT 14377 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 43144 |||| ||| || ||| | | | | |||||| ||| |||||| |||| || Sbjct 14376 GTCCTGGATCTTGGCTTTAACATTGTCGATCGTGTCCGAGCT---TTCCACCTCGAGGGT 14320 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || || || || ||||| || ||||| ||||| Sbjct 14319 GATTGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 14281 >seq26661 Length=2801 Score = 107 bits (118), Expect = 2e-18 Identities = 156/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||||||||| || | || ||||||||| || ||||| || || ||||| || | Sbjct 1845 ACGCAACACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCGGCTAGAGTTCGACC 1786 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || || ||||| || ||||| || | || ||||||||| | || | | ||||| Sbjct 1785 GTCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGAGGGATACCTTCCTT 1726 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 43144 |||| ||||||| ||| | | | | ||||| |||| || || |||| || Sbjct 1725 GTCCTGGATTTTTGCTTTCACGTTATCAATGGTGTCTGAGCTC---TCGACCTCGAGGGT 1669 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || |||||||| | ||||| |||||||| ||||| Sbjct 1668 AATAGTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 1630 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||| ||||| |||| || ||||| ||||| || || || ||||| || || | Sbjct 2073 ACGCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTATAGTCGGCCAGTGTACGGCC 2014 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||||||||||||||| ||||| ||||||||||| | || | | || || Sbjct 2013 ATCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCTTT 1954 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| ||| | || | || ||| | | | ||||| |||| ||||| || | | Sbjct 1953 GTCC-TGAATCTTAGCTTTCACGTTGTCGATGGTGTCTGAGCTC---TCCACCTCAAGGG 1898 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || || || || | ||||| || ||||||||||| Sbjct 1897 TAATAGTCTTACCAGTCAAGGTCTTCACGAAGATTTGCAT 1858 >seq210337 Length=1863 Score = 104 bits (114), Expect = 3e-17 Identities = 155/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||| | ||| | ||| |||||| || || ||||| || ||||| || || | Sbjct 825 ACGAAGCACAAGATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGTCC 884 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || |||| ||||||||| || || || |||| ||||||||| | || | | ||| || Sbjct 885 ATCTTCTAACTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGTGGGATTCCCTCTTT 944 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 43144 |||| ||| || ||||| | | | ||||| |||| ||||| || | || Sbjct 945 GTCCTGGATCTTGGCTTTGACATTATCAATGGTGTCTGAGCTC---TCCACCTCCAAAGT 1001 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||||| || || || ||||| |||||||| ||||| Sbjct 1002 GATGGTTTTTCCGGTAAGGGTCTTGACAAAGATCTGCAT 1040 Score = 102 bits (112), Expect = 9e-17 Identities = 162/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| | | ||||||||| | || | || |||||| ||||| |||||||| || Sbjct 585 TCCTCCACGAAGACGCAACACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAATCGGC 644 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || |||||| | || || ||||||||||||||||| || |||| ||||| || | || Sbjct 645 CAAAGTCCGACCATCCTCGAGCTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGAGG 704 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | | ||||||||| ||| || || | | | | |||||| |||| || Sbjct 705 GATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATCGTGTCTGAGCTC---TC 761 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || | || |||||||| || || || ||||| || || || ||||| Sbjct 762 CACCTCAAGAGTAATGGTTTTACCGGTAAGGGTCTTCACGAAAATCTGCAT 812 Score = 98.7 bits (108), Expect = 1e-15 Identities = 154/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||||||| | || | ||| ||| || || |||||||||||||||||||||| | Sbjct 1281 ACGCAACACAAGGTGGAGAGTGGACTCTTTCTGGATATTGTAATCAGCCAGAGTCCTTCC 1340 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||||||||| ||||| || |||| ||||| || | || | | ||||| Sbjct 1341 ATCTTCAAGCTGCTTACCGGCGAAGATAAGTCTTTGCTGATCCGGAGGGATACCTTCCTT 1400 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 43144 |||| ||| || |||| | | | || || |||| || || || | || Sbjct 1401 GTCCTGGATCTTAGCCTTGACGTTATCAATAGTATCTGAGCTC---TCAACCTCAAGAGT 1457 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||||| || || || || ||||| |||||||| ||||| Sbjct 1458 GATGGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 1496 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||||||| | || || || |||||||||||||| |||| |||||| | || || Sbjct 376 ACCAAATGAAGAGTCGATTCTTTCTGAATATTGTAATCCGCCAAAGTCCGACCATCCTCA 435 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 ||||| ||||||||||| ||||||| ||| ||||| | || | | || |||||| || Sbjct 436 AGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCTTTGTCC-TG 494 Query 43095 ATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 43150 | |||| | || | | | | ||||| |||| || || || | || || || Sbjct 495 AATTTTAGCCTTCACATTATCAATAGTGTCCGAGCTC---TCAACCTCCAAGGTAATAGT 551 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 ||||| || | ||||| ||||||||||||||| Sbjct 552 CTTGCCTGTCAAAGTCTTCACAAAGATTTGCATT 585 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | ||| | ||||| || | ||| ||| ||||| || |||||||| || Sbjct 1042 CCACCTCTGAGACGAAGTACCAAGTGTAGAGTGGACTCTTTTTGGATGTTGTAATCCGCA 1101 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || || |||||||| || || || |||| |||||| || | || Sbjct 1102 AGAGTACGTCCATCTTCAAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGAGGG 1161 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCG---CTCGATTCC 43133 | | || |||||| ||| || |||| | | | ||| ||| ||| || Sbjct 1162 ATACCTTCTTTGTCCTGGATCTTAGCCTTGACATTATCGATCGTATCGGAGCTC---TCA 1218 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | || |||||||| || || || ||||| |||||||||||||| Sbjct 1219 ACCTCAAGAGTAATGGTTTTCCCAGTGAGAGTCTTGACAAAGATTTGCAT 1268 >seq84055 Length=806 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 97 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 156 Query 60126 TACTACCGAGGATTG 60140 |||||||||||| || Sbjct 157 TACTACCGAGGACTG 171 >seq117562 Length=2070 Score = 100 bits (110), Expect = 3e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | ||| | ||| | ||| | ||| |||||| || || |||||||| ||| Sbjct 1457 CCACCTCTGAGACGAAGCACAAGATGGAGTGTAGACTCCTTCTGGATGTTGTAATCCGCC 1398 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||||| |||| || ||||||||||| ||||| || |||| ||||| || | || Sbjct 1397 AGAGTCCTTCCGTCTTCAAGCTGCTTACCGGCGAAGATAAGTCTTTGCTGATCCGGAGGA 1338 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | | ||||||||| ||| || ||||| | | | || || ||| ||| Sbjct 1337 ATACCTTCCTTGTCCTGGATCTTAGCTTTGACGTTATCAATAGTATCTGAGCT---TTCG 1281 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||| || ||||| || || || | ||||| || ||||||||||| Sbjct 1280 ACTTCGAGGGTAATGGTCTTTCCGGTCAAAGTCTTGACGAAGATTTGCAT 1231 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||||||| | || | || |||||| ||||||||||| || || || || || | Sbjct 1673 CGCAACACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCCGCAAGCGTACGACCA 1614 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || ||||||||||||||||| ||||||| |||||| || | || | | |||||| Sbjct 1613 TCCTCGAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGATCCGGAGGAATCCCTTCCTTG 1554 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTG 43145 || ||| || |||| | | | ||||| |||| || || || | || Sbjct 1553 TCTTGGATCTTAGCCTTGACATTGTCTATTGTGTCTGAGCTC---TCAACTTCTAGAGTA 1497 Query 43146 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||||||| || || || ||||| || || || ||||| Sbjct 1496 ATGGTTTTCCCGGTGAGGGTCTTCACGAATATCTGCAT 1459 >seq214945 Length=15579 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/232 (70%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCT--CTCCTTTTGAATATTGTAATCAG 43014 ||||||||||| | | ||||| || | | ||| ||||||||| || |||||||||| Sbjct 5488 CCTCCTCTTAACCTGAGAACCAAGTGGA--GAGCTGACTCCTTTTGGATGTTGTAATCAG 5545 Query 43015 CCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCG 43074 ||| ||| || | || || ||||| ||||| || || || |||| ||| ||||| | | Sbjct 5546 CCAAAGTACGACCATCTTCCAGCTGTTTACCGGCAAAGATCAGTCTCTGTTGGTCTGAAG 5605 Query 43075 GCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATT 43131 | || | || || || ||| || |||| | | || ||||| ||| || Sbjct 5606 GGACTCCTTCTTTCTCTTGGATCTTGGCCTTGACGTTTTCTACTGTGTCCGAGCT---TT 5662 Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || |||| | ||||| ||||| | || |||||||| ||||||||||| Sbjct 5663 CGACCTCGAGGGATATGGTCTTGCCTTTAAGAGTCTTTACGAAGATTTGCAT 5714 Score = 86.0 bits (94), Expect = 7e-12 Identities = 151/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||||||| | || | ||| |||||||| ||||||||||| |||| ||| || | Sbjct 7774 ACGCAACACAAGGTGAAGTGTTGATTCCTTTTGGATATTGTAATCGGCCAAAGTACGGCC 7833 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || ||||| ||||| || || || || | || | ||| | || || | || || Sbjct 7834 GTCCTCGAGCTGTTTACCGGCAAAGATCAGGCTTTGTTTGTCAGAAGGGACTCCTTCTTT 7893 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 43144 || ||| || |||| | | || ||||| ||| ||| || |||| | Sbjct 7894 CTCTTGGATCTTGGCCTTGACGTTTTCTACGGTGTCCGAGCT---TTCGACCTCGAGGGA 7950 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| ||||| || || |||||||| ||||||||||| Sbjct 7951 TATGGTCTTGCCTGTAAGAGTCTTTACGAAGATTTGCAT 7989 >seq54724 Length=7877 Score = 93.3 bits (102), Expect = 5e-14 Identities = 155/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||||||||| || | || ||| || ||||||||||| || |||||||| | | Sbjct 2090 ACGCAACACCAAGTGAAGAGTAGACTCTTTCTGAATATTGTAGTCGGCCAGAGTTCTGCC 2031 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || || ||||| || || || || | || ||||||||| | || | | || || Sbjct 2030 GTCCTCGAGTTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCCGGAGGGATACCTTCTTT 1971 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| ||| || ||| | ||| | | | ||||| |||| || || |||| | Sbjct 1970 GTCCTGGATCTTGGCTTTCA-CGTTGTCGATGGTGTCTGAGCTC---TCAACCTCGAGGG 1915 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | |||||||| || || | ||||| |||||||| ||||| Sbjct 1914 TAATGGTTTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 1875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569907529079840