Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_002486.1 Length=45636 Score E Sequences producing significant alignments: (Bits) Value seq243213 95.1 4e-15 >seq243213 Length=9437 Score = 95.1 bits (104), Expect = 4e-15 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 44538 TGTATGTTGATTTGTCAATTTAAGTGCAACAGTTCATCACATAAAACTTCATAAGGAAAC 44597 |||||| | |||||||| ||||| |||||| ||| || | || || || || | | Sbjct 8505 TGTATGACGGTTTGTCAAATTAAGCGCAACACTTCTTCGGAAAAGACCTCGTATGCAGTT 8564 Query 44598 TTCCAATTTAAACACTTTCTTGGTCGATAATTAATTGAGTCTAATGCATAGT-TAAGTTG 44656 ||||||| ||||||||||||||||||| || ||| | ||| || | ||| | Sbjct 8565 TTCCAATCCAAACACTTTCTTGGTCGATTGTTGATTCTAGAAAGTGCGTAATCTAATTCT 8624 Query 44657 CTCTTGATTTACTTTAGCTAAGTCTGTTTTCTTAGGGAAAAATTCTCTTAGTAAACCATT 44716 ||||| || | | | |||| ||| ||| ||||| || || | || | |||||| Sbjct 8625 GTCTTG-TTGATCATTCCGAAGTTGGTTCCCTTTGGGAAGAACTCACGGAGAAGACCATT 8683 Query 44717 GGTATTTTCATTTGTACCTCTTTGCCATGCGGAATATGGATCAGCGAAGTA 44767 | ||| ||||| | || | |||||||| ||||| ||||| || ||||| Sbjct 8684 TGCATTCTCATTGCTGCCACGTTGCCATGAAGAATAGGGATCCGCAAAGTA 8734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145450567630928