Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq231195 89.7 1e-12 >seq231195 Length=5996 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 ||||| || ||||||| ||||| ||||||||||| |||| ||| || ||| | ||| | Sbjct 3589 GATTTTGAATACGATTACTTTGGATTCAAAACGCTTGAGAGATCATACCTCTTAAAAGTC 3530 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 | || || | || || | ||| |||||| ||||| | || ||||| || || ||| Sbjct 3529 CAAGGAAAAGTTGTTGAGAGGCCTCAACACATGCTGATGAGGGTTGCTGTTGGCATCCAC 3470 Query 248929 AAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACA 248988 |||||||| || || | || | || ||| | |||| | | | ||| | || Sbjct 3469 AAGGATGATATTGACTCTGCAATCAAAACTTACCACTTAATGTCTCAGAGATGGTTCACT 3410 Query 248989 CATGCCACACCGACGCTCTTCAACGCCGGTAC 249020 ||||| | || || ||||||||||| || || Sbjct 3409 CATGCATCTCCTACTCTCTTCAACGCAGGAAC 3378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1070089975515904