Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq27195 230 2e-55
seq146431 187 2e-42
seq210337 118 9e-22
seq117562 102 7e-17
seq167623 100 3e-16
seq153189 100 3e-16
seq78792 98.7 9e-16
seq26664 96.9 3e-15
seq26661 96.9 3e-15
seq214945 93.3 4e-14
seq66861 89.7 5e-13
>seq27195
Length=13093
Score = 230 bits (254), Expect = 2e-55
Identities = 599/895 (67%), Gaps = 35/895 (4%)
Strand=Plus/Plus
Query 57537 AGATT-TGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGA 57595
||||| ||| |||||||||||| | || ||| | || ||| | |||||||| || || ||
Sbjct 8648 AGATTCTGT-ATGTTTCCGATTCACTACCCACAGATCTGGGAGATGTACAAGAAAGCCGA 8706
Query 57596 AGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGA-GCGATTGGGATT 57654
||||||||| ||||||| |||||||||||| || || | || | || | || |||||
Sbjct 8707 AGCATCGTTCTGGACCGCCGAAGAAGTAGATCTATCACAAGA-CGGACGTGACTGGGAGA 8765
Query 57655 CCCTCAAAGAATCTGAGA--GAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATC 57712
||||| || | |||| | | || || |||||||| | || || |||||||||||
Sbjct 8766 ATCTCAACGA--CGGAGAACGTCACTTCATCAAACACGTCCTCGCTTTCTTCGCCGCATC 8823
Query 57713 CGATGGTATTGTTAACGAGAATTTGG----TCGAAAGATTTTCACAAGAAGTGCAAGTGA 57768
|| || || ||| |||||| | | |||| || | ||| || |||||
Sbjct 8824 TGACGGAATCGTTCTAGAGAATCTCGCTTCTCGATTCATGT----CAGATGTACAAGTCT 8879
Query 57769 CGGAGGCGAGATGCTTT-TACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATG 57827
| || ||| | |||||| |||||||| || | || ||||| || | ||||| || |||
Sbjct 8880 CTGAAGCGCG-TGCTTTCTACGGATTCCAGATCGCGATTGAGAATATCCATTCTGAGATG 8938
Query 57828 TATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAAC 57887
||| || || | ||||| ||| | || || ||| | |||| | | || ||| |
Sbjct 8939 TATAGTCTCCTTCTGGATACATACATCAAAGATAACAAAGAGAGAGATCATCTCTTCCGC 8998
Query 57888 GCGATCGAAACAATGCC-CGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAA 57946
|| ||||||||||| || ||| |||| ||||| || | ||| | || | |||||| |
Sbjct 8999 GCAATCGAAACAATCCCTTGCG-TCGCTAAGAAAGCTCAATGGGCTATGACATGGATCGA 9057
Query 57947 AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATT 58006
| | | || ||||| || | | |||| ||||| |||||||||||| ||
Sbjct 9058 TGGATCTCAG---ACTTTCGCTGAACGAATCGTCGCTTTCGCGTGCGTCGAAGGTATCTT 9114
Query 58007 CTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCT 58066
||| || || ||||| | || || ||| | || ||||| || || ||||| || |
Sbjct 9115 CTTCTCCGGTAGCTTCTGTTCGATTTTCTGGCTCAAAAAACGAGGGCTCATGCCTGGGTT 9174
Query 58067 GACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126
|| || |||||||| || || || ||||| || | || ||||| || |||||
Sbjct 9175 AACTTTCTCAAACGAGTTAATCTCACGAGACGAAGGCTTACACTGCGATTTCGCTTGCCT 9234
Query 58127 AATGTACTCTCACATTGTC---AATAAACCGACGCGGGATCGCATCTTGGACATTATCAC 58183
|| ||| | | || || | || | |||| ||| || | | ||| |
Sbjct 9235 GATCTACACAC---TTCTCCGAACGAAGCTGACGGAGGAGCGAGTGAAGTCGATTGTGTG 9291
Query 58184 CGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGG 58243
||| || || | |||||| | |||||||| ||| || || ||| || || | ||
Sbjct 9292 CGACGCTGTGGAGATCGAGAGAGAGTTTGTGTGCGACGCGCTTCCGTGCGCGTTGGTAGG 9351
Query 58244 TATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGA 58303
||||| ||| |||||| |||| |||||||||||||| || || |||||| |
Sbjct 9352 GATGAATCGTGAATTGATGAGTGAGTATATTGAGTTTGTTGCGGATAGGCTTTTGGGTGC 9411
Query 58304 ACT---GATTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGAT 58360
|| | ||| || || ||| || ||||||||||||| ||| | | ||
Sbjct 9412 GCTTGGGTATGGTAAG-GT--GTACGGTGTGACTAATCCGTTTGATTGGATGGAGTTAAT 9468
Query 58361 CTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAA 58415
|||||| | || || || |||||||| || || | |||| | || || || |||
Sbjct 9469 CTCGCTTCAAGGGAAAACTAACTTTTTTGAGAAGAGAGTTGGTGATTACCAGAAA 9523
>seq146431
Length=15796
Score = 187 bits (206), Expect = 2e-42
Identities = 512/772 (66%), Gaps = 23/772 (3%)
Strand=Plus/Minus
Query 57537 AGATT-TGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGA 57595
||||| ||| |||||||||||| | || ||| | || ||| | |||||||| || || ||
Sbjct 4711 AGATTCTGT-ATGTTTCCGATTCACTACCCACAGATCTGGGAGATGTACAAGAAAGCCGA 4653
Query 57596 AGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGA-GCGATTGGGATT 57654
|||||| || ||||||| |||||||||||| || || | || | || | || |||||
Sbjct 4652 AGCATCCTTCTGGACCGCCGAAGAAGTAGATCTATCACAAGA-CGGACGTGACTGGGAAA 4594
Query 57655 CCCTCAAAGAATCTGAGA--GAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATC 57712
||||| || | |||| | | || || |||||||| | || || |||||||||||
Sbjct 4593 ATCTCAACGA--CGGAGAACGTCACTTCATCAAACACGTCCTCGCCTTCTTCGCCGCATC 4536
Query 57713 CGATGGTATTGTTAACGAGAATTTGG----TCGAAAGATTTTCACAAGAAGTGCAAGTGA 57768
|| || || || ||| ||| | | |||| || | ||| || |||||
Sbjct 4535 TGACGGAATCGTCCTCGAAAATCTCGCTTCTCGATTCATGT----CAGATGTACAAGTCT 4480
Query 57769 CGGAGGCGAGATGC-TTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATG 57827
| || ||| | ||| || |||||||||||| | || ||||| || | ||||| || |||
Sbjct 4479 CCGAAGCGCG-TGCATTCTACGGATTTCAAATCGCGATTGAGAATATCCATTCTGAGATG 4421
Query 57828 TATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAAC 57887
||| || | ||||||| ||| | || || ||| | |||| | | || ||| |
Sbjct 4420 TATAGTCTCTTACTCGATACTTACATCAAAGATAACAAAGAGAGAGATCATCTATTCCGC 4361
Query 57888 GCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAA 57947
|| |||||||||| || | || ||||| || | ||| | || | ||||| |
Sbjct 4360 GCAGTCGAAACAATTCCTTGTGTTGCTAAGAAAGCTCAATGGGCTATGACTTGGATCGAT 4301
Query 57948 AGCGC-CACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATT 58006
| | || || || || || | | | || ||||| || |||||||| ||
Sbjct 4300 GGATCTCA----AACTTTTGCTGAACGAATCGTAGCTTTCGCTTGTGTTGAAGGTATCTT 4245
Query 58007 CTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCT 58066
||| || || ||||| | || || ||| | |||||||| || || ||||| || |
Sbjct 4244 CTTCTCAGGTAGCTTCTGTTCGATTTTCTGGCTTAAGAAACGTGGACTCATGCCTGGATT 4185
Query 58067 GACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126
|| || ||||| ||||| || || ||||| ||| | || |||||| || || |
Sbjct 4184 AACCTTCTCTAACGAATTGATCTCACGAGACGAAGGTTTACACTGTGATTTCGCTTGTTT 4125
Query 58127 AATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGA 58186
|| || ||| | | | || | ||| ||| || | | ||| | |||
Sbjct 4124 GATCTATACTCTCTTACGAACGAAGCTCACGGAGGAGCGAGTGAAGTCGATTGTGTGCGA 4065
Query 58187 GGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTAT 58246
||||| ||||| || | |||||||| ||| || || ||| || || | || ||
Sbjct 4064 TGCGGTGGCGATTGAGAGAGAGTTTGTGTGCGACGCGCTTCCGTGCGCGTTGGTTGGGAT 4005
Query 58247 GAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTG 58298
|||| || |||||| |||| |||||||||||||| || || ||||||
Sbjct 4004 GAACCGTGGATTGATGAGTCAGTATATTGAGTTTGTTGCGGATAGGCTTTTG 3953
>seq210337
Length=1863
Score = 118 bits (130), Expect = 9e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || |||||| |||||||||| || || ||| | || ||||| ||
Sbjct 584 ATGCAAATCTTTGTGAAGACTTTGACAGGCAAGACTATTACCTTGGAGGTTGAGAGCTCG 525
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | || || | ||| |||||| ||||| | || || |||||
Sbjct 524 GACACTATTGATAATGTGAAGGCTAAAATTCAGGACAAAGAAGGGATCCCTCCGGACCAA 465
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | || || |||||||| |||||| | || || | |||| || ||||| ||
Sbjct 464 CAGAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTCGGACTTTGGCGGATTACAAT 405
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
||||| |||||||||||||||||| |||| |||
Sbjct 404 ATTCAGAAAGAATCGACTCTTCATTTGGTTCTT 372
>seq117562
Length=2070
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| |||||| |||| || || || || ||| |||| || ||| ||
Sbjct 1231 ATGCAAATCTTCGTCAAGACTTTGACCGGAAAGACCATTACCCTCGAAGTCGAAAGCTCA 1290
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | | || | |||||| | || |||||||||||| | || || || |||
Sbjct 1291 GATACTATTGATAACGTCAAAGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGATCAG 1350
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | || || ||||| || || ||| | |||||| | |||| || ||||| |||
Sbjct 1351 CAAAGACTTATCTTCGCCGGTAAGCAGCTTGAAGACGGAAGGACTCTGGCGGATTACAAC 1410
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || || || || ||||| || ||| | || || || ||||
Sbjct 1411 ATCCAGAAGGAGTCTACACTCCATCTTGTGCTTCGTCTCAGAGGTGGTA 1459
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || |||||| |||||||||| || || ||| | || ||||| ||
Sbjct 1687 ATGCAAATCTTTGTGAAGACTTTGACAGGCAAGACTATTACCTTGGAGGTTGAGAGCTCG 1746
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | ||||| | || |||||||||||| | || || || |||
Sbjct 1747 GACACTATTGATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCTCCGGATCAG 1806
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371
||| | || || || || || || || | ||||| | | | | ||| || || ||
Sbjct 1807 CAGAGACTTATCTTTGCCGGTAAGCAACTCGAAGA-TGGACGCACCTTAGCAGACTACAA 1865
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
||||| ||||| |||||||||||| ||||||||
Sbjct 1866 TATTCAGAAAGAGTCGACTCTTCATTTGGTACTT 1899
>seq167623
Length=7090
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| || || || || || || ||||| || |||| || ||| | |||
Sbjct 2393 ATGCAGATCTTCGTGAAAACCCTAACCGGGAAGACGATAACTCTCGAGGTCGAATCATCC 2452
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | |||||| || || ||||||||||| | || || || |||
Sbjct 2453 GATACCATCGACAATGTCAAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGATCAG 2512
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| | || ||||| || ||||| | |||||| ||| | |||||| |||
Sbjct 2513 CAGCGATTGATTTTCGCCGGAAAACAACTCGAAGACGGCCGTACTCTCGCCGATTACAAC 2572
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
|| || || |||||||| |||||||| || |||
Sbjct 2573 ATCCAGAAGGAATCGACGCTTCATCTCGTCCTT 2605
>seq153189
Length=17048
Score = 100 bits (110), Expect = 3e-16
Identities = 151/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| |||||||| || ||||| || |||||| | || || || ||
Sbjct 14737 ATGCAGATTTTCGTCAAGACTCTTACTGGCAAGACAATCACCCTTGAAGTCGAGAGCTCT 14796
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| | || |||||||||||| | || || ||||||
Sbjct 14797 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCGGACCAG 14856
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA--CTCTATGACTATGAGCGATTATA 31370
|||||||| || |||||||| |||||| | || || || ||| || | ||||| |
Sbjct 14857 CAGCGTCTCATCTTCGCTGGTAAACAGCTCGAGGATGGTCGCACACT-TGCG-GATTACA 14914
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGT 31401
|||||||||| || || ||| | || ||||
Sbjct 14915 ACATTCAAAAGGAGTCAACTTTGCACTTGGT 14945
Score = 93.3 bits (102), Expect = 4e-14
Identities = 148/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| |||||||| || || || || |||||| |||| || ||| ||
Sbjct 14281 ATGCAGATCTTCGTTAAGACTCTCACCGGAAAGACAATCACCCTCGAGGTGGAAAGCTCG 14340
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || ||| | || |||||||||||| | || || || |||
Sbjct 14341 GACACGATCGACAATGTTAAAGCCAAGATCCAGGACAAGGAAGGTATTCCTCCGGATCAG 14400
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371
||| | | || ||||| || || || |||||||| | | | || || ||| || ||
Sbjct 14401 CAGAGATTGATCTTCGCCGGAAAGCAATTGGAAGA-TGGACGCACCTTGGCCGACTACAA 14459
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401
|||||| || || ||||| ||||| ||||
Sbjct 14460 CATTCAGAAGGAGTCGACCCTTCACTTGGT 14489
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| || || |||| || || || || ||| |||| || || ||
Sbjct 14509 ATGCAGATCTTCGTCAAAACCTTGACTGGTAAGACTATTACCCTCGAGGTGGAGAGCTCA 14568
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| | || |||||||||||| | || || ||||||
Sbjct 14569 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCGGACCAG 14628
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA--CTCTATGACTATGAGCGATTATA 31370
|||||||| || |||||||| |||||| | || || || ||| || | ||||| |
Sbjct 14629 CAGCGTCTCATCTTCGCTGGTAAACAGCTCGAGGATGGTCGCACACT-TGCG-GATTACA 14686
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGT 31401
|||||||||| || || ||| | || ||||
Sbjct 14687 ACATTCAAAAGGAGTCAACTTTGCACTTGGT 14717
>seq78792
Length=14290
Score = 98.7 bits (108), Expect = 9e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| || || || || || || || || ||| | || |||||| | ||
Sbjct 11443 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCCTAGAGGTTGAATCTTCG 11502
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || ||| || || ||||||||||| | || || ||||||
Sbjct 11503 GACACAATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGAATTCCACCGGACCAG 11562
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||| | || || || || ||||| ||||||||| | || | |||||| |||
Sbjct 11563 CAACGTTTGATCTTTGCCGGAAAACAATTGGAAGACGGAAGAACACTCGCCGATTACAAC 11622
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || |||||||| |||||| | || ||
Sbjct 11623 ATCCAGAAGGAATCGACGCTTCATTTAGTTCT 11654
>seq26664
Length=6282
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| || || || || || || ||||| || |||| || ||| | |||
Sbjct 5872 ATGCAGATCTTCGTGAAAACCCTAACCGGGAAGACGATAACTCTCGAGGTCGAATCATCC 5813
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | |||||| || || ||||||||||| | || || ||||||
Sbjct 5812 GATACCATCGACAATGTCAAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGACCAG 5753
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| | || ||||| || ||||| | |||||| ||| | ||| || |||
Sbjct 5752 CAGCGATTGATCTTCGCGGGAAAACAACTCGAAGACGGACGTACTCTCGCCGACTACAAC 5693
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
|| || || ||||| || |||||||| || |||
Sbjct 5692 ATCCAGAAGGAATCAACGCTTCATCTCGTGCTT 5660
>seq26661
Length=2801
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| || ||||| || || || || |||||| |||| || ||| ||
Sbjct 946 ATGCAGATCTTCGTGAAAACTCTCACCGGAAAGACTATCACCCTCGAGGTGGAAAGTTCT 1005
Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| |||| | | || ||| | |||||||||||| | || || || ||
Sbjct 1006 GACACGATCGACAACGTTAAGGCAAAGA-TCCAGGACAAGGAAGGTATTCCTCCGGATCA 1064
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | || || || ||||| || || |||||||| || || ||||| ||
Sbjct 1065 GCAGAGGCTTATCTTTGCTGGAAAGCAATTGGAAGATGGCCGTACCTTGGCGGATTACAA 1124
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||| ||||| ||||| || ||||| |||| || || || | || ||||
Sbjct 1125 CATCCAAAAGGAATCAACGCTTCACTTGGTGCTAAGGCTTCGTGGTGGTA 1174
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| |||||| |||| ||||| ||||| ||| |||| ||||| ||
Sbjct 1174 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACGATTACCCTCGAGGTTGAGAGTTCT 1233
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| | || |||||||||||| | || || ||||||
Sbjct 1234 GACACCATTGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGAATTCCACCGGACCAG 1293
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || ||||| || || || | || ||| ||| | ||| || |||
Sbjct 1294 CAGAGGTTGATCTTCGCCGGAAAGCAACTCGAGGACGGCCGTACTCTCGCCGACTACAAC 1353
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||| || ||||| |||||||| || || || || | || ||||
Sbjct 1354 ATCCAAAAGGAGTCGACCCTTCATCTCGTCCTCAGGCTTCGTGGAGGTA 1402
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||| |||| || || || || ||| | || || || ||
Sbjct 1858 ATGCAAATCTTCGTGAAGACCTTGACTGGTAAGACTATTACCCTTGAGGTGGAGAGCTCA 1917
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || ||| | || |||||| ||||| | || || ||||||
Sbjct 1918 GACACCATCGACAACGTGAAAGCTAAGATTCAGGACAAAGAAGGTATTCCTCCGGACCAG 1977
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || |||||||| || ||| | || || || || ||| ||||||
Sbjct 1978 CAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGTACACTGGCCGACTATAAC 2037
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401
||||| || ||||| ||||| || ||||
Sbjct 2038 ATTCAGAAGGAATCTACTCTGCACTTGGT 2066
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| || || || || ||||| || |||||| | || || || ||
Sbjct 2086 ATGCAGATATTCGTGAAAACCCTAACCGGCAAGACTATCACCCTGGAAGTCGAGAGTTCT 2145
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| | || |||||||||||| | || || ||||||
Sbjct 2146 GACACAATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCGGACCAG 2205
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || ||||| |||||| | || || | || || ||||| |||
Sbjct 2206 CAGCGTCTCATCTTTGCTGGTAAACAGCTCGAGGATGGTCGCACACTGGCGGATTACAAC 2265
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || ||||| ||||| || || |||| ||
Sbjct 2266 ATACAGAAAGAGTCGACCCTCCACTTGGTCCT 2297
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || || || ||||| |||| ||||| || || ||| |||| || || ||
Sbjct 1629 CATGCAGATCTTTGTCAAGACCTTGACGGGCAAGACTATTACCCTCGAGGTCGAGAGCTC 1688
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || ||| | ||| |||||||||||| | || || |||||
Sbjct 1689 AGACACCATTGATAACGTGAAAGCAAAAATCCAGGACAAGGAAGGTATCCCTCCGGACCA 1748
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | | || ||||| || || || | |||||| | ||| | ||| || ||
Sbjct 1749 GCAGAGATTGATCTTCGCCGGAAAGCAACTTGAAGACGGTCGAACTCTAGCCGACTACAA 1808
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401
||| ||||| || || |||||||| ||||
Sbjct 1809 CATCCAAAAGGAGTCAACTCTTCACTTGGT 1838
>seq214945
Length=15579
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| |||||||||||||| | |||||| || || || |||| || ||| ||
Sbjct 5714 ATGCAAATCTTCGTAAAGACTCTTAAAGGCAAGACCATATCCCTCGAGGTCGAAAGCTCG 5655
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| || |||| ||||| | || || || ||||| || || | |||||
Sbjct 5654 GACACAGTAGAAAACGTCAAGGCCAAGATCCAAGAGAAAGAAGGAGTCCCTTCAGACCAA 5595
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | || || || || || |||||| ||||||| | ||| || ||||| |||
Sbjct 5594 CAGAGACTGATCTTTGCCGGTAAACAGCTGGAAGATGGTCGTACTTTGGCTGATTACAAC 5535
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||| || || |||| || |||| || || | || || ||||
Sbjct 5534 ATCCAAAAGGAGTCAGCTCTCCACTTGGTTCTCAGGTTAAGAGGAGGTA 5486
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| |||||||||||||| |||||||| || || || |||| || ||| ||
Sbjct 7989 ATGCAAATCTTCGTAAAGACTCTTACAGGCAAGACCATATCCCTCGAGGTCGAAAGCTCG 7930
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| || |||| ||||| | || || || ||||| || || | ||| |
Sbjct 7929 GACACCGTAGAAAACGTCAAGGCCAAGATCCAAGAGAAAGAAGGAGTCCCTTCTGACAAA 7870
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | || || || || || |||||| | || ||| ||| || |||||| ||
Sbjct 7869 CAAAGCCTGATCTTTGCCGGTAAACAGCTCGAGGACGGCCGTACTTTGGCCGATTACAAT 7810
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401
|| ||||| ||||| || ||||| || ||
Sbjct 7809 ATCCAAAAGGAATCAACACTTCACCTTGT 7781
>seq66861
Length=20397
Score = 89.7 bits (98), Expect = 5e-13
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248
||| ||||| || ||||| || || || || || || ||||| || |||| |||||| |
Sbjct 17256 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACGCTCGAGGTTGAATC 17315
Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
||||| | |||| | ||||| || || ||||||||||| | || || ||
Sbjct 17316 ATCCGATACGATCGACAATGTCAAGGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGA 17375
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
||||| || | || ||||| || ||||| | |||||| ||| | ||| ||
Sbjct 17376 TCAGCAACGATTGATTTTCGCCGGAAAACAACTTGAAGACGGACGTACTCTCGCCGACTA 17435
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
||||| || || |||||||| ||||| || || |||
Sbjct 17436 CAACATCCAGAAGGAATCGACGCTTCACCTTGTCCTT 17472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444277384205760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |