Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_003157.5 Length=43106 Score E Sequences producing significant alignments: (Bits) Value seq249645 111 4e-20 >seq249645 Length=476466 Score = 111 bits (122), Expect = 4e-20 Identities = 275/406 (68%), Gaps = 11/406 (3%) Strand=Plus/Minus Query 380 GTGGATGGCGTTCTAGATGCGGTGTCAGGCTATGCCAATGGTAGA---GGCGATACCACC 436 || ||||| || ||||||| || ||||| ||||| || |||| | | || | | | Sbjct 303854 GTTGATGGTGTCGTAGATGCCGTCTCAGGTTATGCAAACGGTAACACTGCCAATCCAAGC 303795 Query 437 AACTACCAGTTAATTCATCAGA-CTGGTCATGCAGAAACCGTTGAAGTGACCTATGATGC 495 | | || | |||| | || | || ||||| ||||||||| |||| || || ||||| Sbjct 303794 TATGAGCAAGTGATTCG-CGGATCAGGACATGCCGAAACCGTTAAAGTTACTTACGATGC 303736 Query 496 GAACCGTATTAGCTTGAAAGAAT-TATTACTGCATTTTTTCCGAATTATTGACCCAACCA 554 | ||| | || | | | | ||| ||| ||||| | |||||||||| | Sbjct 303735 TGATAAAATT-GATTTAGATACGGTCTTAAAATATTACTTCCGTGTCGTTGACCCAACTA 303677 Query 555 GTCTTAATAAGCAAGGAAATGATCGCGGTAGTCAATACCGAACTGGGATTTACTATACTG 614 | | ||||||||||| ||||||||||| || || || |||| |||| ||||| | Sbjct 303676 GCGTAAATAAGCAAGGCAATGATCGCGGCGTACAGTATCGCTCTGGCGTTTATTATACCG 303617 Query 615 ACAAAGCAGATTTAGCTATTATTGATGAGGTCTTCAAAGAAAAAGCTAAG-GATTACAAG 673 | |||| |||| ||| ||||||||| || || ||| | || || | ||||| Sbjct 303616 ATAAAGAAGATAAAGCGGTTATTGATGCGG-CTCTCAAGCGAGTGCAGAGTCAATACAAA 303558 Query 674 aaaaaaaTAGTGGTTGAAAAGGCGCCATTGAAACACTTTAT-TAAGGCCGAAGAGTACCA 732 ||||| | ||||| ||||| | |||| | ||| ||| | | ||| |||| ||| || Sbjct 303557 CAAAAAGTCGTGGTCGAAAACGAAGCATT-AGACAATTTTTATTTGGCTGAAGCGTATCA 303499 Query 733 CCAAGATTACCTCAAGAAAAATCCAAATGGCTACTGCCATATTGAT 778 || || || | ||||||||||||||||| || || ||||| Sbjct 303498 TCAGGACTATTTGGCAAAAAATCCAAATGGCTATTGTCACGTTGAT 303453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137380258930848