Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_003291.2 Length=37618 Score E Sequences producing significant alignments: (Bits) Value seq99429 80.6 6e-11 >seq99429 Length=368 Score = 80.6 bits (88), Expect = 6e-11 Identities = 187/280 (67%), Gaps = 4/280 (1%) Strand=Plus/Minus Query 33454 AACGGATATATCAATTTGCAAAATGGAGAACTTATCAATCATGACAGGCAAAAAATGTTT 33513 ||||||||||| || | ||||| ||| | | ||||||| | |||||||| Sbjct 358 AACGGATATATTGATCTATCTGATGGAACTCTTCACGAGCATGACATCAAGAAAATGTTC 299 Query 33514 ACAAA--AATTAGCAACATCGAATATACAGATAAAATTGATGCGCCGCTTTGGCAAGAAT 33571 | || ||| | ||| | |||||| |||| | |||| || ||||||| | Sbjct 298 TCGAAGAAATCA--AACGTTGAATATTCAGACACTGTTGAGTGTCCTGAATGGCAAGCTT 241 Query 33572 TTTTAAAGGATATTTTTGCAGGTGATAAAGAGTTAATCAATTATATTCAAAAAGCAGTCG 33631 |||| || | | ||| || || || || ||||| | || ||||||||||| |||| Sbjct 240 TTTTGAATCAGACTTTCAATGGAGACAACGAATTAATTGACTACATTCAAAAAGCGGTCG 181 Query 33632 GTTATTCACTTTCTGGATCTACATCAGAGCAAGTAATGTTTATCCTTTTCGGAAATGGAC 33691 | |||||| | | || || |||||| || ||||||||||||| |||| || | Sbjct 180 GGTATTCATTAACAGGTTCAGTTGAAGAGCAGGTCATGTTTATCCTTTACGGATCAGGGC 121 Query 33692 GTAATGGGAAGTCTGTTTTTCTCGACATTATCAATGACAT 33731 | || || || |||||||| | || | | |||| |||| Sbjct 120 GAAACGGTAAATCTGTTTTCATGGATACTCTCAAGCACAT 81 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119874387726880