Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq29837 91.5 2e-13
seq29830 86.0 9e-12
>seq29837
Length=4748
Score = 91.5 bits (100), Expect = 2e-13
Identities = 133/183 (73%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 70185 TCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGC 70244
|||||| |||||| ||| | |||| |||||| | ||||||||| | ||| |
Sbjct 3708 TCAAGAACAATCCTGATGATCGACGGATTATAATGTCGGCTTGGAATCCTTCTGATCTTA 3649
Query 70245 ACCAAATGGCACTACCACCGTGTCAC-TGTTTGGCTCAGTTTTACTCGTACGA-TGGCAA 70302
| | |||||||| || || || ||| ||||| | |||||||| | | ||| ||| |
Sbjct 3648 AACTGATGGCACTTCCTCCATGCCACATGTTTT-CACAGTTTTA-TGTTGCGAATGGAGA 3591
Query 70303 ATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACAT 70362
| | |||||| |||||||||| | ||||||||||| || || ||||| ||||||||
Sbjct 3590 ACTTTCATGCCAAATGTATCAGCGCTCAGCCGACATGGGTCTTGGCGTACCATTTAACAT 3531
Query 70363 TGC 70365
|||
Sbjct 3530 TGC 3528
>seq29830
Length=9971
Score = 86.0 bits (94), Expect = 9e-12
Identities = 132/183 (72%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 70185 TCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGC 70244
|||||| |||||| ||| | |||| |||||| | ||||||||| | ||| |
Sbjct 1052 TCAAGAACAATCCTGATGATCGACGGATTATAATGTCGGCTTGGAATCCTTCTGATCTTA 1111
Query 70245 ACCAAATGGCACTACCACCGTGTCAC-TGTTTGGCTCAGTTTTACTCGTACGA-TGGCAA 70302
| | |||||||| || || || ||| ||||| | |||||||| | | ||| ||| |
Sbjct 1112 AACTGATGGCACTTCCTCCATGCCACATGTTTT-CACAGTTTTA-TGTTGCGAATGGAGA 1169
Query 70303 ATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACAT 70362
| | ||||| |||||||||| | ||||| ||||| ||||| ||||| ||||||||
Sbjct 1170 ACTTTCATGTCAAATGTATCAGCGCTCAGCCGATATGGGTCTCGGCGTACCATTTAACAT 1229
Query 70363 TGC 70365
|||
Sbjct 1230 TGC 1232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 738583802901280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |