Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_004305.1 Length=42259 Score E Sequences producing significant alignments: (Bits) Value seq25145 123 7e-24 >seq25145 Length=439 Score = 123 bits (136), Expect = 7e-24 Identities = 184/260 (71%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 15819 GGGCCACTCACGCGAGCAAACGCG---CTTGGACCTGAACCATAAATGGCCTTCATGTAG 15875 |||||||| || |||||||| || ||| || || || || ||||||||||||||| Sbjct 282 GGGCCACTGACACGAGCAAAGGCAGAACTT---CCAGAGCCGTAGATGGCCTTCATGTAG 226 Query 15876 TGAATACCAGCTAGCAGGTCGTCATACCCGTTGAGCGGATTGTTGTGACCTTTGAACTTA 15935 |||||||| || ||||| |||||||| ||||| || |||||| || |||||| Sbjct 225 TGAATACCGGCAAGCAGATCGTCATAGCCGTTATAAACATCGTTGTGGCCGGGAAACTTA 166 Query 15936 TACGCATCAAATGTTGGCTGAATCGTCTGAACGAGCCCTTTAGAAGGGTGCCCAAGTTGA 15995 |||||| || |||||| ||| || || || ||||| | ||||| || || | Sbjct 165 AACGCATTGAACGTTGGCCCAATAGTTTGTACAAGCCCCATTGAAGGTATGCCGGCTTTA 106 Query 15996 GCGTTACGGTCCCAAGTGTTAATCACCGATGGGTCCCCGTTTGACTCGCGTTTGATAACC 16055 ||||| | ||||| |||||| || || | || || || || || | |||||| Sbjct 105 GCGTTGCTATCCCACAAGTTAATTGCCCTAGGATTACCATTGGATTCACGCTGGATAACT 46 Query 16056 TTCATCCAAGCAGCCACTTG 16075 |||||| ||||| ||||| Sbjct 45 CGCATCCATGCAGCAACTTG 26 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134678459931256