Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_004305.1
Length=42259
Score E
Sequences producing significant alignments: (Bits) Value
seq25145 123 7e-24
>seq25145
Length=439
Score = 123 bits (136), Expect = 7e-24
Identities = 184/260 (71%), Gaps = 6/260 (2%)
Strand=Plus/Minus
Query 15819 GGGCCACTCACGCGAGCAAACGCG---CTTGGACCTGAACCATAAATGGCCTTCATGTAG 15875
|||||||| || |||||||| || ||| || || || || |||||||||||||||
Sbjct 282 GGGCCACTGACACGAGCAAAGGCAGAACTT---CCAGAGCCGTAGATGGCCTTCATGTAG 226
Query 15876 TGAATACCAGCTAGCAGGTCGTCATACCCGTTGAGCGGATTGTTGTGACCTTTGAACTTA 15935
|||||||| || ||||| |||||||| ||||| || |||||| || ||||||
Sbjct 225 TGAATACCGGCAAGCAGATCGTCATAGCCGTTATAAACATCGTTGTGGCCGGGAAACTTA 166
Query 15936 TACGCATCAAATGTTGGCTGAATCGTCTGAACGAGCCCTTTAGAAGGGTGCCCAAGTTGA 15995
|||||| || |||||| ||| || || || ||||| | ||||| || || |
Sbjct 165 AACGCATTGAACGTTGGCCCAATAGTTTGTACAAGCCCCATTGAAGGTATGCCGGCTTTA 106
Query 15996 GCGTTACGGTCCCAAGTGTTAATCACCGATGGGTCCCCGTTTGACTCGCGTTTGATAACC 16055
||||| | ||||| |||||| || || | || || || || || | ||||||
Sbjct 105 GCGTTGCTATCCCACAAGTTAATTGCCCTAGGATTACCATTGGATTCACGCTGGATAACT 46
Query 16056 TTCATCCAAGCAGCCACTTG 16075
|||||| ||||| |||||
Sbjct 45 CGCATCCATGCAGCAACTTG 26
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 134678459931256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |