Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq78792 100 2e-16
seq153189 82.4 5e-11
>seq78792
Length=14290
Score = 100 bits (110), Expect = 2e-16
Identities = 169/245 (69%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| |||||||| |||| || ||||| | ||||| || || || || |||||||| |
Sbjct 11669 CCTCCTCTTAATCGCAGAACTAAATGAAGCGTCGATTCCTTCTGGATGTTGTAATCGGCG 11610
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
| | | ||| |||||||| ||||| ||| || |||||||||||||||| ||
Sbjct 11609 AGTGTTCTTCCGTCTTCCAATTGTTTTCCGGCAAAGATCAAACGTTGCTGGTCCGGTGGA 11550
Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322
|| ||||| || || ||| | ||| || | | || ||||| | || |||
Sbjct 11549 ATTCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATTGTGTCCGAAGATTCAACC 11490
Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTATGGTTAAT 33382
|| || ||||| || || ||||| || ||||| ||||| || ||||| | | || || |
Sbjct 11489 TCTAGGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTCTCTGTTTTTT 11430
Query 33383 GTTCG 33387
| |||
Sbjct 11429 GCTCG 11425
>seq153189
Length=17048
Score = 82.4 bits (90), Expect = 5e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||||||||| || | |||||||| || || || ||||| || | ||| || ||
Sbjct 14495 CGCAACACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGCCAAGGTGCGTCCA 14436
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| |||||||||||||| || || || | ||||| |||| || || ||||| ||
Sbjct 14435 TCTTCCAATTGCTTTCCGGCGAAGATCAATCTCTGCTGATCCGGAGGAATACCTTCCTTG 14376
Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334
|| ||| ||| || | | |||||||| | || || || || || ||
Sbjct 14375 TCCTGGATCTTGGCTTTAACATTGTCGATCGTGTCCGAGCTTTCCACCTCGAGGGTGATT 14316
Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||||| || ||||| || ||||| || |||||
Sbjct 14315 GTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 14281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 317739391962744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |