Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq70799 159 8e-34
seq214945 154 3e-32
seq146431 154 3e-32
seq50902 152 1e-31
seq54724 147 5e-30
seq167623 145 2e-29
seq204555 143 6e-29
seq91578 143 6e-29
seq26664 141 2e-28
seq117562 138 3e-27
seq210337 134 3e-26
seq66861 134 3e-26
seq27195 131 4e-25
seq26661 129 1e-24
seq224638 122 2e-22
seq153189 109 1e-18
seq265878 107 4e-18
seq209069 107 4e-18
seq185166 104 5e-17
seq46463 100 7e-16
seq251003 84.2 5e-11
>seq70799
Length=497
Score = 159 bits (176), Expect = 8e-34
Identities = 217/300 (72%), Gaps = 2/300 (1%)
Strand=Plus/Minus
Query 238590 CTATGGAATTCCGCCCAGATACAAATGGTAAGACTAGGCAAAATGCATAGTTTCTTACGA 238649
|| |||||||| || || ||||| |||||| |||||| ||||| ||||| | ||
Sbjct 303 CTGTGGAATTCTGCACAAATACAGTTGGTAAAGGAAGGCAAGATGCACGGTTTCCTTCGC 244
Query 238650 ATGTATTGGGCTAAAAAGATACTTGAATGGACTAGAT-CTCCAAAGGAAGCTCTTAGATA 238708
||||| ||||||||||||||||| ||||||||| ||| ||||| | ||| || |
Sbjct 243 ATGTACTGGGCTAAAAAGATACTGGAATGGACT-GATACTCCAGATAGAGCACTGGCCGA 185
Query 238709 TAGTATTTATCTGAACGATAAATACGAACTCGACGGTACGGATCCTAACGGATACGTAGG 238768
| |||||||| || || || || | |||||| || || | || | || ||
Sbjct 184 TGCCATTTATCTCAATGACAAGTATAGCATGGACGGTCGCGACCCAAGTGGTTTTGTTGG 125
Query 238769 TTGTATGTGGTCAATATGTGGATTACACGATAGGGCATGGTCTGAGAGACCTATATTTGG 238828
|||||||||||||||||||| | || ||| || ||| || ||| || |||||
Sbjct 124 ATGTATGTGGTCAATATGTGGTATTCATGATCAGGGGTGGAGAGAAAGAGAAATTTTTGG 65
Query 238829 AAAAGTTAGATACATGAATTATGAAGGAACTAAGAAAAAATTTGATGTAAATGCTTTTAT 238888
|||| |||| || ||||| ||||||||| |||| ||| ||||| |||||||||| ||
Sbjct 64 AAAAATTAGGTATATGAACTATGAAGGATGCAAGAGAAAGTTTGACATAAATGCTTTCAT 5
>seq214945
Length=15579
Score = 154 bits (170), Expect = 3e-32
Identities = 164/214 (77%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | ||| || |||||||||||| | || |||| || ||| | ||| ||
Sbjct 7549 AAGAACAAGGTGAAGTGTTGACTCTTTCTGAATACTGTAATCAGCTAAAGTCCGACCATC 7608
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|||||| ||||| || ||||| |||||||||||||| ||||| || || |||||||| ||
Sbjct 7609 TTCTAGCTGTTTACCGGCAAAGATTAGCCTCTGTTGGTCAGGTGGAATCCCTTCTTTGTC 7668
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525
|| ||||| || || || || || | ||||| | || | |||||||| || ||||| |
Sbjct 7669 TTGTATCTTCGCCTTCACGTTATCAATCGTATC-CGAGCTCTCTACCTCAAGAGTAATGG 7727
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||| || || | || || ||||| || |||||
Sbjct 7728 TCTTCCCCGTCAAAGTCTTGACAAAGATTTGCAT 7761
Score = 120 bits (132), Expect = 7e-22
Identities = 154/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| || || | ||| ||||| || || ||||| || || | | ||| | ||||| ||
Sbjct 7781 ACAAGGTGAAGTGTTGATTCCTTTTGGATATTGTAATCGGCCAAAGTACGGCCGTCCTCG 7840
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
|| ||||| || ||||| || || || |||| |||| ||| | ||||||||| || ||
Sbjct 7841 AGCTGTTTACCGGCAAAGATCAGGCTTTGTTTGTCAGAAGGGACTCCTTCTTTCTCTTGG 7900
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAG-GTTCTACCTCTAGTGTAATAGTCTT 104529
||||| || || || ||||||||||| || | || ||| ||||| || | || |||||
Sbjct 7901 ATCTTGGCCTTGACGTTTTCTACGGTGTC-CGAGCTTTCGACCTCGAGGGATATGGTCTT 7959
Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| ||||| || ||||| || || |||||
Sbjct 7960 GCCTGTAAGAGTCTTTACGAAGATTTGCAT 7989
>seq146431
Length=15796
Score = 154 bits (170), Expect = 3e-32
Identities = 378/562 (67%), Gaps = 16/562 (3%)
Strand=Plus/Minus
Query 268733 ATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTG 268792
|| ||| ||||||||| | |||| || || || ||||| | ||||||||||||||
Sbjct 4678 ATCTGGGAGATGTACAAGAAAGCCGAAGCATCCTTCTGGACCGCCGAAGAAGTAGATCTA 4619
Query 268793 TCTTATGACTTAATAGATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATATCTTAT 268852
|| | ||| | || ||| ||||| | || | |||| | || || |
Sbjct 4618 TCACAAGACGGACGTGACTGGGAAAATCTCAACGACGGAGAACGTCACTTCATCAAACAC 4559
Query 268853 ATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAG--TAGAGAAGT 268910
| || || || || || | ||| || ||||| ||||||||| | | || |
Sbjct 4558 GTCCTCGCCTTCTTCGCCGCATCTGACGGAATCGTCCTCGAAAATCTCGCTTCTCGA--T 4501
Query 268911 TC-TGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATA 268969
|| ||||| || ||||| | | ||||| | || |||||||| || || || ||
Sbjct 4500 TCATGTCA-GATGTACAAGTCTCCGAAGCGCGTGCATTCTACGGATTTCAAATCGCGATT 4442
Query 268970 GAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAAC 269029
|| ||||| ||||| |||||||| ||||| ||| | |||||||| || | ||||||||
Sbjct 4441 GAGAATATCCATTCTGAGATGTATAGTCTCTTACTCGATACTTACATCAAAGATAACAAA 4382
Query 269030 GAAAAGAAAAGA-CTATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGA 269088
|| | || | | ||||| | | ||| || ||||| || ||| || |
Sbjct 4381 GAGA-GAGATCATCTATTCCGCGCAGTCGAAACAATTCCTTGTGTTGCTAAGAAAGCTCA 4323
Query 269089 ATGGGCTCTGAAATGGATAAACGATAGCGCGC---CTTACGGAGAAAGGTTAGTTGCTTT 269145
||||||| ||| ||||| |||| | | | ||| | ||| | | || |||||
Sbjct 4322 ATGGGCTATGACTTGGAT---CGATGGATCTCAAACTTTTGCTGAACGAATCGTAGCTTT 4266
Query 269146 TGCCGCTGTAGAAGGTATATTCTTTTCGGGGT-CTTTTGCCGCTATCTTTTGGTTGAAGA 269204
|| ||| |||||||| ||||| || || ||| || | || || ||| | ||||
Sbjct 4265 CGCTTGTGTTGAAGGTATCTTCTTCTCAGGTAGCTTCTGTT-CGATTTTCTGGCTTAAGA 4207
Query 269205 AAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTT 269264
|| | || || ||||| |||||||| ||||||||||||||||| | ||||||||||
Sbjct 4206 AACGTGGACTCATGCCTGGATTAACCTTCTCTAACGAATTGATCTCACGAGACGAAGGTT 4147
Query 269265 TACACTGCGACTTCGCTTGTTT 269286
||||||| || |||||||||||
Sbjct 4146 TACACTGTGATTTCGCTTGTTT 4125
>seq50902
Length=6384
Score = 152 bits (168), Expect = 1e-31
Identities = 154/198 (78%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || ||||||||||| || ||||| | || || | ||| ||||| || ||||||||
Sbjct 4552 GTGGACTCTTTCTGAATGTTGTAGTCCGCTAATGTCCGACCATCTTCGAGCTGTTTTCCC 4493
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| |||||||||||||| || ||||| || ||||||||||| |||||||| | |||
Sbjct 4492 GCAAAGATTAGCCTCTGTTGGTCCGGAGGGATCCCTTCTTTATCTTGAATCTTCGTTTTC 4433
Query 104483 ACATTTTCTACGGTATCGCTAGGTT-CTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||||| || | ||||| | || || | ||||| || || || || ||||| || | ||
Sbjct 4432 ACATTGTCAATTGTATC-CGAGCTTTCGACCTCAAGAGTGATGGTTTTACCCGTCAAAGT 4374
Query 104542 TTTTACAAATATCTGCAT 104559
|| || |||||||||||
Sbjct 4373 CTTGACGAATATCTGCAT 4356
>seq54724
Length=7877
Score = 147 bits (162), Expect = 5e-30
Identities = 153/198 (77%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| |||||||||||||| ||||| | |||||||| ||||| || ||||| |||||
Sbjct 2071 GTAGACTCTTTCTGAATATTGTAGTCGGCCAGAGTTCTGCCGTCCTCGAGTTGCTTTCCG 2012
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | ||||| || || ||||| || |||||||| ||||| ||||| |||||
Sbjct 2011 GCAAAGATCAATCTCTGCTGGTCCGGAGGGATACCTTCTTTGTCCTGGATCTTGGCTTTC 1952
Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | ||| || || | || ||||| || ||||| || ||||| || | ||
Sbjct 1951 ACGTTGTCGATGGTGTC-TGAGCTCTCAACCTCGAGGGTAATGGTTTTACCGGTCAAGGT 1893
Query 104542 TTTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 1892 CTTGACAAAGATCTGCAT 1875
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| || || | || | || ||||| ||||| || || || || | | || |
Sbjct 1636 AGCCTTAGAACCAAGTGAAGCGTGGATTCCTTCTGGATGTTGTAATCCGCCAAGGTACGG 1577
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| ||||| | || ||||| || || || | ||||| ||||| ||||| ||||||||
Sbjct 1576 CCATCTTCCAACTGCTTTCCGGCGAAGATCAATCTCTGCTGATCCGGAGGAATTCCTTCC 1517
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521
|||||||||||||| || || || || || | ||||| | ||| ||||| || ||
Sbjct 1516 TTATCCTGAATCTTAGCCTTAACGTTGTCGATCGTATCAGAACTTTCCACCTCGAGGGTG 1457
Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||||||| || || || ||||| ||||| ||||||||
Sbjct 1456 ATAGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 1419
>seq167623
Length=7090
Score = 145 bits (160), Expect = 2e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || ||||| | || ||||| ||||| || || || || | ||||| | |||||
Sbjct 2605 AAGGACGAGATGAAGCGTCGATTCCTTCTGGATGTTGTAATCGGCGAGAGTACGGCCGTC 2546
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| ||||||||||| || ||||| | | ||| ||||| || || |||||||| || ||
Sbjct 2545 TTCGAGTTGTTTTCCGGCGAAAATCAATCGCTGCTGATCCGGTGGGATTCCTTCCTTGTC 2486
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|| ||||| ||||| ||||| || | ||||||| | ||| ||||| || || || ||
Sbjct 2485 TTGGATCTTCGCTTTGACATTGTCGATGGTATCGGATGATTCGACCTCGAGAGTTATCGT 2426
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || || || ||||| || || ||||||||
Sbjct 2425 CTTCCCGGTTAGGGTTTTCACGAAGATCTGCAT 2393
>seq204555
Length=10983
Score = 143 bits (158), Expect = 6e-29
Identities = 152/198 (77%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || ||||||||||| || ||||| | || || | ||| ||||| |||||||| ||
Sbjct 1294 GTTGACTCTTTCTGAATGTTGTAGTCCGCTAATGTCCGACCATCTTCGAGTTGTTTCCCC 1353
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| ||||||||||| || || || || || ||||||||||| ||||||||||| |||
Sbjct 1354 GCAAAGATTAGCCTCTGCTGGTCCGGTGGGATCCCTTCTTTATCTTGAATCTTTGCCTTT 1413
Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||||| || | || || || | || || || | || || || ||||| ||||| ||
Sbjct 1414 ACATTGTCAATCGTGTC-TGAGCTCTCAACTTCCAAAGTTATGGTTTTACCGGTAAGGGT 1472
Query 104542 TTTTACAAATATCTGCAT 104559
|| || |||||||||||
Sbjct 1473 CTTAACGAATATCTGCAT 1490
>seq91578
Length=16840
Score = 143 bits (158), Expect = 6e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || ||||| | ||| ||||| ||||| || || ||||| | ||||| | |||||
Sbjct 256 AAGGACGAGATGAAGTGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGAGTACGTCCGTC 315
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| ||||||||||| || ||||| | | |||||||| || || |||||||| || ||
Sbjct 316 TTCGAGTTGTTTTCCGGCGAAAATCAATCGTTGTTGATCCGGTGGGATTCCTTCCTTGTC 375
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|| ||||| || || ||||| || | ||||| | ||| ||||| || || || ||
Sbjct 376 TTGGATCTTAGCCTTGACATTGTCGATCGTATCCGATGATTCAACCTCGAGCGTTATCGT 435
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTG 104565
||| || || || ||||| || || |||||||| || ||
Sbjct 436 CTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTTTG 474
>seq26664
Length=6282
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || ||||| | || ||||| ||||| || || ||||| | ||||| | |||||
Sbjct 5660 AAGCACGAGATGAAGCGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGAGTACGTCCGTC 5719
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| ||||||||||| || || || | | ||| || || || || |||||||| || ||
Sbjct 5720 TTCGAGTTGTTTTCCCGCGAAGATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTC 5779
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|| ||||| ||||| ||||| || | ||||||| | ||| ||||| || || || ||
Sbjct 5780 TTGGATCTTCGCTTTGACATTGTCGATGGTATCGGATGATTCGACCTCGAGAGTTATCGT 5839
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || || || ||||| || || ||||||||
Sbjct 5840 CTTCCCGGTTAGGGTTTTCACGAAGATCTGCAT 5872
>seq117562
Length=2070
Score = 138 bits (152), Expect = 3e-27
Identities = 161/215 (75%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
|||||| | ||| | || || |||||||||||||| ||||| | || || | || ||
Sbjct 1899 AAGTACCAAATGAAGAGTCGACTCTTTCTGAATATTGTAGTCTGCTAAGGTGCGTCCATC 1840
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| ||||| || || ||||| || || ||||| ||||| ||||| || ||||| || ||
Sbjct 1839 TTCGAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGAGGGATCCCTTCCTTGTC 1780
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525
||||||||| || || ||||| || | || || | || | || ||||| | |||||||
Sbjct 1779 CTGAATCTTAGCCTTGACATTATCAATAGTGTC-CGAGCTCTCAACCTCCAAGGTAATAG 1721
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|||| || || | || || ||||| || ||||||
Sbjct 1720 TCTTGCCTGTCAAAGTCTTCACAAAGATTTGCATT 1686
Score = 120 bits (132), Expect = 7e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || ||||||||||| ||||| | || || | ||| || || || || || |||
Sbjct 1655 GTAGACTCCTTCTGAATATTGTAGTCCGCAAGCGTACGACCATCCTCGAGCTGCTTACCA 1596
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || ||||| ||||| ||||| || ||||| || || || ||||| || ||
Sbjct 1595 GCGAAGATGAGTCTCTGCTGATCCGGAGGAATCCCTTCCTTGTCTTGGATCTTAGCCTTG 1536
Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||||| |||| || || || | || || ||||| ||||| || || || || || ||
Sbjct 1535 ACATTGTCTATTGTGTCTG-AGCTCTCAACTTCTAGAGTAATGGTTTTCCCGGTGAGGGT 1477
Query 104542 TTTTACAAATATCTGCAT 104559
|| || |||||||||||
Sbjct 1476 CTTCACGAATATCTGCAT 1459
>seq210337
Length=1863
Score = 134 bits (148), Expect = 3e-26
Identities = 170/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390
|||| || | || | ||| || | ||| | || ||||||||||||||||| || || |
Sbjct 356 TTCCACCACGAAGACGAAGAACCAAATGAAGAGTCGATTCTTTCTGAATATTGTAATCCG 415
Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450
| ||| | ||| || || || ||||| ||||| || || || |||||||| || ||||
Sbjct 416 CCAAAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAG 475
Query 104451 GTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCT 104509
| || |||||||| |||||||| || || || ||||| || | || || | || | ||
Sbjct 476 GGATCCCTTCTTTGTCCTGAATTTTAGCCTTCACATTATCAATAGTGTC-CGAGCTCTCA 534
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
||||| | ||||||||||| || || | || || ||||| || ||||||
Sbjct 535 ACCTCCAAGGTAATAGTCTTGCCTGTCAAAGTCTTCACAAAGATTTGCATT 585
Score = 122 bits (134), Expect = 2e-22
Identities = 151/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| || || || || ||||| || |||||||||| | || | || ||||||||||||
Sbjct 1522 TGCAAGGTCGACTCCTTCTGGATGTTATAGTCAGCCAAGGTACGGCCATCTTCTAGTTGT 1581
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| || || || || | | || ||||| ||||| || ||||| || ||||| ||||||
Sbjct 1582 TTACCGGCGAAGATCAATCGTTGCTGATCCGGAGGAATCCCTTCCTTGTCCTGGATCTTT 1641
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGT 104535
|| || || || || | ||| || || | || ||||| || || || ||||| |||||
Sbjct 1642 GCCTTGACGTTGTCGATGGTGTC-AGAGCTCTCGACCTCGAGAGTTATGGTCTTTCCAGT 1700
Query 104536 AAGTGTTTTTACAAATATCTGCAT 104559
||| ||||| || ||||| |||||
Sbjct 1701 AAGCGTTTTCACGAATATTTGCAT 1724
>seq66861
Length=20397
Score = 134 bits (148), Expect = 3e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || ||||| ||||| || || ||||| | ||||| | |||||
Sbjct 17472 AAGGACAAGGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCGAGAGTACGTCCGTC 17413
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| ||||||||||| || ||||| | | || ||||| || || |||||||| || ||
Sbjct 17412 TTCAAGTTGTTTTCCGGCGAAAATCAATCGTTGCTGATCCGGTGGGATTCCTTCCTTGTC 17353
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|| ||||| || || ||||| || | |||||| | ||| ||||| || || || ||
Sbjct 17352 TTGGATCTTCGCCTTGACATTGTCGATCGTATCGGATGATTCAACCTCGAGCGTTATCGT 17293
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTG 104565
||| || || || ||||| || || |||||||| || ||
Sbjct 17292 CTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTTTG 17254
>seq27195
Length=13093
Score = 131 bits (144), Expect = 4e-25
Identities = 371/559 (66%), Gaps = 16/559 (3%)
Strand=Plus/Plus
Query 268733 ATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTG 268792
|| ||| ||||||||| | |||| || || || ||||| | ||||||||||||||
Sbjct 8681 ATCTGGGAGATGTACAAGAAAGCCGAAGCATCGTTCTGGACCGCCGAAGAAGTAGATCTA 8740
Query 268793 TCTTATGACTTAATAGATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATATCTTAT 268852
|| | ||| | || ||| | ||| | || | |||| | || || |
Sbjct 8741 TCACAAGACGGACGTGACTGGGAGAATCTCAACGACGGAGAACGTCACTTCATCAAACAC 8800
Query 268853 ATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAG--TAGAGAAGT 268910
| || || || || || | ||| || |||||| || ||||| | | || |
Sbjct 8801 GTCCTCGCTTTCTTCGCCGCATCTGACGGAATCGTTCTAGAGAATCTCGCTTCTCGA--T 8858
Query 268911 TC-TGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATA 268969
|| ||||| || ||||| | ||||||| | ||| |||||||||||||| || ||
Sbjct 8859 TCATGTCA-GATGTACAAGTCTCTGAAGCGCGTGCTTTCTACGGATTCCAGATCGCGATT 8917
Query 268970 GAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAAC 269029
|| ||||| ||||| |||||||| ||||| | | ||||| || || | ||||||||
Sbjct 8918 GAGAATATCCATTCTGAGATGTATAGTCTCCTTCTGGATACATACATCAAAGATAACAAA 8977
Query 269030 GAAAAGAAAAGA-CTATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGA 269088
|| | || | | || || | || ||| || || || || ||| || |
Sbjct 8978 GAGA-GAGATCATCTCTTCCGCGCAATCGAAACAATCCCTTGCGTCGCTAAGAAAGCTCA 9036
Query 269089 ATGGGCTCTGAAATGGATAAACGATAGCGCGC---CTTACGGAGAAAGGTTAGTTGCTTT 269145
||||||| ||| |||||| |||| | | | ||| || ||| | | || |||||
Sbjct 9037 ATGGGCTATGACATGGAT---CGATGGATCTCAGACTTTCGCTGAACGAATCGTCGCTTT 9093
Query 269146 TGCCGCTGTAGAAGGTATATTCTTTTCGGGGT-CTTTTGCCGCTATCTTTTGGTTGAAGA 269204
|| || |||||||| ||||| || || ||| || | || || ||| | || |
Sbjct 9094 CGCGTGCGTCGAAGGTATCTTCTTCTCCGGTAGCTTCTGTT-CGATTTTCTGGCTCAAAA 9152
Query 269205 AAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTT 269264
|| |||| || ||||| || ||||||||||| ||||| || || | |||||||| |
Sbjct 9153 AACGAGGGCTCATGCCTGGGTTAACTTTCTCAAACGAGTTAATCTCACGAGACGAAGGCT 9212
Query 269265 TACACTGCGACTTCGCTTG 269283
|||||||||| ||||||||
Sbjct 9213 TACACTGCGATTTCGCTTG 9231
>seq26661
Length=2801
Score = 129 bits (142), Expect = 1e-24
Identities = 149/198 (75%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || || || || || ||||| | |||||||| ||||||||| ||||| |||||
Sbjct 1826 GTTGACTCCTTTTGGATGTTGTAGTCGGCTAGAGTTCGACCGTCTTCAAGTTGCTTTCCG 1767
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || | ||||| || || ||||| || ||||| || ||||| || ||||||||
Sbjct 1766 GCGAAGATCAATCTCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATTTTTGCTTTC 1707
Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | ||| || || | || ||||| || ||||||||||| || || | ||
Sbjct 1706 ACGTTATCAATGGTGTCTG-AGCTCTCGACCTCGAGGGTAATAGTCTTGCCCGTCAAGGT 1648
Query 104542 TTTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 1647 CTTGACAAAGATCTGCAT 1630
Score = 129 bits (142), Expect = 1e-24
Identities = 149/198 (75%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| |||||||| |||||||| | || || | || || || || || || |||
Sbjct 2054 GTAGATTCCTTCTGAATGTTATAGTCGGCCAGTGTACGGCCATCCTCGAGCTGCTTACCA 1995
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||| || || ||||| || |||||||| ||||||||||| |||||
Sbjct 1994 GCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCTTTGTCCTGAATCTTAGCTTTC 1935
Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | ||| || || | || ||||| || ||||||||||||||||| | ||
Sbjct 1934 ACGTTGTCGATGGTGTCTG-AGCTCTCCACCTCAAGGGTAATAGTCTTACCAGTCAAGGT 1876
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 1875 CTTCACGAAGATTTGCAT 1858
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| || || | || | || ||||| || || || || || || | | || |
Sbjct 1163 AGCCTTAGCACCAAGTGAAGCGTTGATTCCTTTTGGATGTTGTAATCCGCCAAGGTACGG 1104
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| ||||| | ||| ||||||||||| || |||||||| ||||| ||||| || |||||
Sbjct 1103 CCATCTTCCAATTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGAATACCTTCC 1044
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521
|| ||||| |||||||| || || || || | || || | ||| ||||| || ||
Sbjct 1043 TTGTCCTGGATCTTTGCCTTAACGTTGTCGATCGTGTCAGAACTTTCCACCTCGAGGGTG 984
Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||||||| || || || ||||| || || ||||||||
Sbjct 983 ATAGTCTTTCCGGTGAGAGTTTTCACGAAGATCTGCAT 946
Score = 107 bits (118), Expect = 4e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || |||||||| || || || || | || || | ||| || || || ||||| |||
Sbjct 2282 GTCGACTCTTTCTGTATGTTGTAATCCGCCAGTGTGCGACCATCCTCGAGCTGTTTACCA 2223
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | ||| || || || || || ||||| || ||||| ||||| || ||
Sbjct 2222 GCAAAGATGAGACGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTG 2163
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | || || | || || || || || |||||||| || || || |||
Sbjct 2162 ACATTGTCAATTGTGTCAGAACTCTCGACTTCCAGGGTGATAGTCTTGCCGGTTAGGGTT 2103
Query 104543 TTTACAAATATCTGCAT 104559
|| || |||||||||||
Sbjct 2102 TTCACGAATATCTGCAT 2086
>seq224638
Length=5969
Score = 122 bits (134), Expect = 2e-22
Identities = 133/174 (76%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || ||||||||||| || || || | || || | ||| ||||| || ||||||||
Sbjct 3353 GTTGACTCTTTCTGAATGTTGTAATCCGCTAATGTCCGACCATCTTCGAGCTGTTTTCCC 3412
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| ||||||||||| || || ||||| || | ||||||||| |||||||| || ||
Sbjct 3413 GCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCTTTCTTTATCTTGAATCTTCGCCTTC 3472
Query 104483 ACATTTTCTACGGTATCGCTAG-GTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535
||||| || | ||||| | || ||| ||||| || || || ||||| || ||
Sbjct 3473 ACATTGTCAATCGTATC-CGAGCTTTCGACCTCAAGAGTGATCGTCTTTCCCGT 3525
>seq153189
Length=17048
Score = 109 bits (120), Expect = 1e-18
Identities = 148/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| || || || || || ||||| || || || | || || | ||| || || || |||
Sbjct 14711 TGCAAAGTTGACTCCTTTTGAATGTTGTAATCCGCAAGTGTGCGACCATCCTCGAGCTGT 14652
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| ||||| || || || | ||| || || || || || ||||| || ||||| |||||
Sbjct 14651 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCCTGGATCTTG 14592
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGT 104535
|| || || || || | ||| || || | || ||||| || |||||||||||||||||
Sbjct 14591 GCCTTGACGTTGTCAATGGTGTCTG-AGCTCTCCACCTCGAGGGTAATAGTCTTACCAGT 14533
Query 104536 AAGTGTTTTTACAAATATCTGCAT 104559
| ||||| || || ||||||||
Sbjct 14532 CAAGGTTTTGACGAAGATCTGCAT 14509
>seq265878
Length=14687
Score = 107 bits (118), Expect = 4e-18
Identities = 107/139 (77%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390
|||| || || ||||| | || | ||| | || || |||||||| ||||| || || |
Sbjct 5457 TTCCACCCCTAAGCCTCAAGACCAAATGAAGAGTCGACTCTTTCTGGATATTGTAATCCG 5398
Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450
| |||| || |||||||||||||| |||||||| || | |||||||||||||| |
Sbjct 5397 CCAATGTTCGGCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCTCTGTTGATCAGGTG 5338
Query 104451 GTATTCCTTCTTTATCCTG 104469
||||||| ||||| |||||
Sbjct 5337 GTATTCCCTCTTTGTCCTG 5319
>seq209069
Length=2205
Score = 107 bits (118), Expect = 4e-18
Identities = 107/139 (77%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390
|||| ||||| ||||| | || ||||| | || || ||||| || || || || || |
Sbjct 1687 TTCCACCTCTGAGCCTCAAGACAAGATGAAGAGTGGACTCTTTGTGGATGTTGTAATCCG 1746
Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450
|| ||| |||| ||||| ||||| || | |||||| || ||||| ||||||||||| |
Sbjct 1747 CTAAGGTTGTACCATCTTCAAGTTGCTTACAAGCAAAGATCAGCCTTTGTTGATCAGGTG 1806
Query 104451 GTATTCCTTCTTTATCCTG 104469
|||| |||||||| |||||
Sbjct 1807 GTATACCTTCTTTGTCCTG 1825
>seq185166
Length=13725
Score = 104 bits (114), Expect = 5e-17
Identities = 87/107 (81%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || |||||||| || || || || | || |||| ||| |||||||||||||| |||
Sbjct 3761 GTCGACTCTTTCTGGATGTTGTAATCCGCTAATGTTCGACCATCTTCTAGTTGTTTACCA 3702
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469
||||| || | |||||||||||||| |||||||| ||||| |||||
Sbjct 3701 GCAAAGATCAATCTCTGTTGATCAGGTGGTATTCCCTCTTTGTCCTG 3655
>seq46463
Length=250
Score = 100 bits (110), Expect = 7e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | || | ||||||| || | ||||||||||||||||||||| ||||||
Sbjct 110 ATTCCTCCACGAAGACGGAGTACTAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCA 169
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||| || | || ||||| | ||||||||| || || || | | |||||| || ||
Sbjct 170 GATAATGTACGGCCATCTTCCAATTGTTTTCCGGCGAAGATCAATCGCTGTTGGTCTGGT 229
Query 104450 GGTATTCCTTCTTTATCCTG 104469
|| |||||||| || || ||
Sbjct 230 GGGATTCCTTCCTTGTCTTG 249
>seq251003
Length=6073
Score = 84.2 bits (92), Expect = 5e-11
Identities = 90/118 (76%), Gaps = 1/118 (1%)
Strand=Plus/Plus
Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515
|||||||| ||||| ||||| ||||| ||||| || | ||| ||||| || |||||
Sbjct 2969 CCTTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCGCTGCTCTCGACCTCG 3028
Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT-GTGTACAGTA 104572
|| || || || || || || || ||||| || || ||||||||||| |||| ||||
Sbjct 3029 AGAGTGATGGTTTTGCCGGTGAGGGTTTTCACGAAGATCTGCATTTTGGTGTTAAGTA 3086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1147456174513424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |