Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq104206 104 6e-18 >seq104206 Length=286 Score = 104 bits (114), Expect = 6e-18 Identities = 164/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 21577 TTTGCATGGTTCCACCAACGCCTACGATAACTTCGGTAGTGAACCTATCCTGTCCGCTTT 21636 ||||||| || || |||| ||| | || ||| |||||| | | || || ||| Sbjct 1 TTTGCATTGTACCTCCAATATTTACAACAATTTCTGTAGTGTAGCGTTCTAAACCATTTT 60 Query 21637 GATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAGCCTTTTCGCA 21696 |||||||||||||||| || ||||| ||||||| ||| || | ||| |||||||| | Sbjct 61 GATCCTGCCATTTTCTAGTTTGCAATGATCCTTCAATATATACTTGAGAACCTTTTCGAA 120 Query 21697 GATATTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACGCGGTGCCACTCCGTCT 21756 ||||||||| |||||||| || | ||| || | || | | ||||| || || | Sbjct 121 GATATTCGCCTGCAATTTCAGCTAATTTACCAAATAAAACTATTCTATGCCATTCAGTTT 180 Query 21757 GCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGTAGCAACTGT 21811 || || | |||||||| | ||||| ||| | |||||| || || | ||| Sbjct 181 TTTCTTTATTTTCTCCAGTATTTTTATCTTTCCAATTTTCTGAAGTTGCTAATGT 235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124419917330680