Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_006936.1 Length=36674 Score E Sequences producing significant alignments: (Bits) Value seq214111 123 6e-24 >seq214111 Length=231 Score = 123 bits (136), Expect = 6e-24 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 2175 CAAAGCGAACTCTGACAAGCAGTTAATTAAACTAATTGAAGAAGTTGGTGAATTATCTGA 2234 |||||| || || || |||||||| | ||||| | ||||| || || | | || Sbjct 1 CAAAGCTAATAGCGATAAACAGTTAATCGAGTTAATTAAGGAAGTAGGGCAACTTGCCGA 60 Query 2235 AGCACATAACAAGGATTGGCGTGACAAGCAGATTGACAGTGTTGGCGACATCTTCGTTGT 2294 ||| || || || | | || ||||| |||||||| ||| |||| ||||| ||||| Sbjct 61 AGCTCACAATAAAGGATATCGAGACAAACAGATTGATAGTATTGGTGACATTGCGGTTGT 120 Query 2295 ATTGACAATTTACGCATTACAAAACGGCCTACACTTAGATGATTGCGTCAAAGAAGCGTA 2354 ||||| || || || ||||| ||||| ||||| ||||||| || ||||||||||| || Sbjct 121 TTTGACCATCTATGCTTTACAGAACGGTCTACATCTAGATGACTGTGTCAAAGAAGCCTA 180 Query 2355 CAATACGATCAAAGATCGCGATGGTAAGATGATCGATGGCGTGTTTATCAA 2405 ||||| || || |||| |||||| | | || || || |||||||| Sbjct 181 TAATACAATTAAGAATCGAACTGGTAAAACAAAAGACGGTGTATTTATCAA 231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116863173729696