Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_006945.1 Length=14844 Score E Sequences producing significant alignments: (Bits) Value seq202864 114 1e-21 seq70767 114 1e-21 >seq202864 Length=952 Score = 114 bits (126), Expect = 1e-21 Identities = 65/66 (98%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 9313 GTGTTTGACGACTTTGTCGGAAAGAAACGTCTATCAAAATTGGCGCAAATGATGACGCCG 9372 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 952 GTGTTTGACGATTTTGTCGGAAAGAAACGTCTATCAAAATTGGCGCAAATGATGACGCCG 893 Query 9373 GACTTA 9378 |||||| Sbjct 892 GACTTA 887 >seq70767 Length=496 Score = 114 bits (126), Expect = 1e-21 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 5047 AAATGACAGACATGCTAAAAGCAATTGAAGAAAACCCCTTTCTATTACGATTCGGTGACG 5106 |||||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||| Sbjct 100 AAATGACAGACATGTTAAAAGCAATTGAAGAAAATCCCTTTCTATTACGATTTGGAGACG 41 Query 5107 GACAATTCTTCGC 5119 ||||||||||||| Sbjct 40 GACAATTCTTCGC 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47235996735148