Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq104206 114 4e-21 >seq104206 Length=286 Score = 114 bits (126), Expect = 4e-21 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 32941 TTCGGTAGTGAACCGATTCTGT-CCACTTTGGTCCTGCCATTTTCTTGTCCGCAATTTGC 32999 ||| |||||| | || |||| ||| |||| |||||||||||||| || ||||| | Sbjct 32 TTCTGTAGTGTAGCG-TTCTAAACCATTTTGATCCTGCCATTTTCTAGTTTGCAATGATC 90 Query 33000 CTTCAAGATAAACCTCAGAGCCTTTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTTCC 33059 |||||| ||| || | ||| |||||||| ||||| |||| |||||||| || | ||| | Sbjct 91 CTTCAATATATACTTGAGAACCTTTTCGAAGATATTCGCCTGCAATTTCAGCTAATTTAC 150 Query 33060 CGCTCATCACCACACGGTGCCACTCCGTCTGCTCCTTTTGCTCGCCAGTATTTTTATCTC 33119 | | || | | ||||| || || | || || | || ||||||||||||||| Sbjct 151 CAAATAAAACTATTCTATGCCATTCAGTTTTTTCTTTATTTTCTCCAGTATTTTTATCTT 210 Query 33120 GCCATTGTTCTGACGTAGCTATTGTCA 33146 ||| | |||||| || |||| ||||| Sbjct 211 TCCAATTTTCTGAAGTTGCTAATGTCA 237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149482532135632