Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_007058.1 Length=43155 Score E Sequences producing significant alignments: (Bits) Value seq81513 176 1e-39 >seq81513 Length=399 Score = 176 bits (194), Expect = 1e-39 Identities = 198/261 (76%), Gaps = 3/261 (1%) Strand=Plus/Plus Query 34028 TGGTTTAAATGCAATACATTACAAGATACCAGAAAGATAACGACGGTACTTATTCCGTCG 34087 || |||||||||| | || || |||||||| |||| |||||||| ||||||||||| Sbjct 141 TGATTTAAATGCAGCAAATCACTAGATACCAATTGGATAGCGACGGTATTTATTCCGTCG 200 Query 34088 TTGCTACTGGTGTTGAACTTGAACAAAGTCACATTG-ACTTACTAGAAAACGGATATCCA 34146 |||| |||||||||||| | ||| | ||||||| | ||||| |||| ||||| ||| Sbjct 201 TTGCCACTGGTGTTGAATTAGAAAATAGTCACACAGAACTTA-TAGATAACGGTTATAGC 259 Query 34147 CTAAAAGCAGAAGTAGAGGTTCCGGACAATaaaaaaaCTATCTATAGAACAACGCaaaaa 34206 |||| || | ||| ||||| || |||||| | | ||||| || ||||| ||||| Sbjct 260 TTAAACGCTAATGTAACTGTTCCAGATAATAAATTGA-TTTCTATTGACCAACGTAAAAA 318 Query 34207 aaTATTCGCAATGTGTAGAGATATAGAACTTCACTGGGGCGAACCAGTAGAATCAACTAG 34266 ||||| || ||||||| |||||| ||| | ||||||| |||||||||||| || || Sbjct 319 GATATTTGCCATGTGTAAAGATATTGAATTGTACTGGGGAGAACCAGTAGAAGCATTAAG 378 Query 34267 AAAATTATTACAAACAGAATT 34287 | || ||| |||| ||||| Sbjct 379 ACAAAGATTTCAAAGTGAATT 399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137536561352312