Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_007734.1
Length=40867
Score E
Sequences producing significant alignments: (Bits) Value
seq158858 143 7e-30
>seq158858
Length=235449
Score = 143 bits (158), Expect = 7e-30
Identities = 193/269 (72%), Gaps = 0/269 (0%)
Strand=Plus/Plus
Query 17829 AAGTGTCCGTATACAATGAAGCCTAAATATATCACTGTTCACAACACATATAATGATGCT 17888
|||||||| ||| | ||||| | | || || || || || ||||| |||||||||||
Sbjct 160030 AAGTGTCCTTATTCTATGAAAGCAGAGTACATTACAGTGCATAACACTTATAATGATGCG 160089
Query 17889 CCAGCTGAAAATGAAGTGAGTTACATGATTAGTAACAATAATGAGGTGTCGTTTCATATT 17948
|| ||| | || || || | ||||||||| | || | ||| ||||| || || || |
Sbjct 160090 CCTGCTAAGAACGAGGTAAATTACATGATCGGAAATACTAACGAGGTTTCATTCCACTTC 160149
Query 17949 GCAGTAGATGACAAGAAAGCGATTCAAGGTATTCCGTTGGAACGTAATGCATGGGCTTGC 18008
||||||||||| | ||| ||||||||||||||| | || |||||||| ||| |||
Sbjct 160150 GCAGTAGATGATATCGAAGTTATTCAAGGTATTCCGGTTGATCGTAATGCTTGGCATTGT 160209
Query 18009 GGAGACGGCAATGGTTCGGGGAATCGTCAATCCATTTCTGTAGAAATCTGTTATTCAAAA 18068
|| || || |||| || || || |||| || ||| ||||||||||| ||| |
Sbjct 160210 GGTGATGGTGGTGGTAACGGAAACCGAAAATCTATCGGTGTTGAAATCTGTTACTCATTA 160269
Query 18069 TCAGGAGGAGATAGATACTATAAAGCTGA 18097
|| || || ||||| | ||||||||
Sbjct 160270 TCTGGTGGTCCAAGATATGAAAAAGCTGA 160298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130238195223544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |