Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_007734.1 Length=40867 Score E Sequences producing significant alignments: (Bits) Value seq158858 143 7e-30 >seq158858 Length=235449 Score = 143 bits (158), Expect = 7e-30 Identities = 193/269 (72%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 17829 AAGTGTCCGTATACAATGAAGCCTAAATATATCACTGTTCACAACACATATAATGATGCT 17888 |||||||| ||| | ||||| | | || || || || || ||||| ||||||||||| Sbjct 160030 AAGTGTCCTTATTCTATGAAAGCAGAGTACATTACAGTGCATAACACTTATAATGATGCG 160089 Query 17889 CCAGCTGAAAATGAAGTGAGTTACATGATTAGTAACAATAATGAGGTGTCGTTTCATATT 17948 || ||| | || || || | ||||||||| | || | ||| ||||| || || || | Sbjct 160090 CCTGCTAAGAACGAGGTAAATTACATGATCGGAAATACTAACGAGGTTTCATTCCACTTC 160149 Query 17949 GCAGTAGATGACAAGAAAGCGATTCAAGGTATTCCGTTGGAACGTAATGCATGGGCTTGC 18008 ||||||||||| | ||| ||||||||||||||| | || |||||||| ||| ||| Sbjct 160150 GCAGTAGATGATATCGAAGTTATTCAAGGTATTCCGGTTGATCGTAATGCTTGGCATTGT 160209 Query 18009 GGAGACGGCAATGGTTCGGGGAATCGTCAATCCATTTCTGTAGAAATCTGTTATTCAAAA 18068 || || || |||| || || || |||| || ||| ||||||||||| ||| | Sbjct 160210 GGTGATGGTGGTGGTAACGGAAACCGAAAATCTATCGGTGTTGAAATCTGTTACTCATTA 160269 Query 18069 TCAGGAGGAGATAGATACTATAAAGCTGA 18097 || || || ||||| | |||||||| Sbjct 160270 TCTGGTGGTCCAAGATATGAAAAAGCTGA 160298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130238195223544