Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_007814.1 Length=37974 Score E Sequences producing significant alignments: (Bits) Value seq158858 156 1e-33 >seq158858 Length=235449 Score = 156 bits (172), Expect = 1e-33 Identities = 250/359 (70%), Gaps = 0/359 (0%) Strand=Plus/Minus Query 15170 AACCTTTTATTAGGTTCAAATGTTAAATATGAAAAAACAGATTACCTAATCAATCAATAT 15229 ||||| ||||||| || ||| | | | || |||||||||||| || || ||| Sbjct 22245 AACCTATTATTAGAATCCAATATGGACTTCTCAACAACAGATTACCTTATTAAGATGTAT 22186 Query 15230 TCTCTAACTGAAAACTTCTTTGCGGGTGAGGAATATACCTTTGTAATTAAGGGAAGCGTC 15289 | | | || | | || | || | || || || ||||| || || |||| || Sbjct 22185 AGTTTGTCCGAGGATTGGATTACTGGACAAGAGTACACTTTTGTTATCAAAGGAACTGTT 22126 Query 15290 CCACAAGGTCAGAAATTTGGGATTTGGCAGAATGGCGGGTCTAGCAATGTTGGATATGCA 15349 || ||| || |||||||| || ||||| ||||| || || | || || || | || Sbjct 22125 CCTGCAGGACAAAAATTTGGTATATGGCAAAATGGTGGTTCAAATAAAGTAGGGGAAGCC 22066 Query 15350 ACAAGTGTTTATGCTAATGGAATAACGTATGTAACCTTTAAAGCTGTTGCAACTACAAGT 15409 |||| |||| |||||| |||| |||||||| || ||||| | || || |||| | Sbjct 22065 ACAACAACATATGTGAATGGAGTAACTTATGTAACTTTCAAAGCAATAGCTACAACAACT 22006 Query 15410 GGAAATGAAAGAAAGTTAAGTTTATATAACTATCCAAGTAATACTACAAAGGCAATTGTA 15469 || ||||||||||| |||||||||||||||| || ||||| ||| | | |||| Sbjct 22005 GGTAATGAAAGAAAACTAAGTTTATATAACTACCCTCAAAATACCACACTATCCACTGTA 21946 Query 15470 GAATGGGTTGCCTTGTATAAAGGGAATAAGCCACAGGATTGGACGCCAGCGCCTGAAGA 15528 || ||||||||| | || ||||| ||||||||| ||| ||| | || || || ||||| Sbjct 21945 GATTGGGTTGCCCTATACAAAGGAAATAAGCCAATGGACTGGTCTCCTGCTCCGGAAGA 21887 Score = 143 bits (158), Expect = 6e-30 Identities = 193/269 (72%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 17691 AAGTGTCCGTATACAATGAAGCCTAAATATATCACTGTTCACAACACATATAATGATGCT 17750 |||||||| ||| | ||||| | | || || || || || ||||| ||||||||||| Sbjct 160030 AAGTGTCCTTATTCTATGAAAGCAGAGTACATTACAGTGCATAACACTTATAATGATGCG 160089 Query 17751 CCAGCTGAAAATGAAGTGAGTTACATGATTAGTAACAATAATGAGGTGTCGTTTCATATT 17810 || ||| | || || || | ||||||||| | || | ||| ||||| || || || | Sbjct 160090 CCTGCTAAGAACGAGGTAAATTACATGATCGGAAATACTAACGAGGTTTCATTCCACTTC 160149 Query 17811 GCAGTAGATGACAAGAAAGCGATTCAAGGTATTCCGTTGGAACGTAATGCATGGGCTTGC 17870 ||||||||||| | ||| ||||||||||||||| | || |||||||| ||| ||| Sbjct 160150 GCAGTAGATGATATCGAAGTTATTCAAGGTATTCCGGTTGATCGTAATGCTTGGCATTGT 160209 Query 17871 GGAGACGGCAATGGTTCGGGGAATCGTCAATCCATTTCTGTAGAAATCTGTTATTCAAAA 17930 || || || |||| || || || |||| || ||| ||||||||||| ||| | Sbjct 160210 GGTGATGGTGGTGGTAACGGAAACCGAAAATCTATCGGTGTTGAAATCTGTTACTCATTA 160269 Query 17931 TCAGGAGGAGATAGATACTATAAAGCTGA 17959 || || || ||||| | |||||||| Sbjct 160270 TCTGGTGGTCCAAGATATGAAAAAGCTGA 160298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121009972666496