Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq53167 131 1e-25
seq54724 120 2e-22
seq210337 116 2e-21
seq160490 113 3e-20
seq26661 113 3e-20
seq117562 107 1e-18
seq91578 105 4e-18
seq78792 104 2e-17
seq50902 100 2e-16
seq153189 98.7 7e-16
seq204555 96.9 2e-15
seq66861 96.9 2e-15
seq214945 95.1 8e-15
seq236154 93.3 3e-14
seq124860 84.2 1e-11
>seq53167
Length=7246
Score = 131 bits (144), Expect = 1e-25
Identities = 86/95 (91%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||| ||||||||| |||| || ||||||||
Sbjct 6344 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 6285
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 6284 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 6250
Score = 96.9 bits (106), Expect = 2e-15
Identities = 67/76 (88%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||| ||||||| |||| |||| |||||||||||||||||||||||| |
Sbjct 4353 CTCTCTTTTCAAAGTCCTTTTCATCTTTACCTCGCGGTACTTGTTCGCTATCGGTCTCTC 4294
Query 20007 GGTAATATTTAGCCTT 20022
| ||||||||||||
Sbjct 4293 GCCCATATTTAGCCTT 4278
>seq54724
Length=7877
Score = 120 bits (132), Expect = 2e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | |||||||||||| |||||||| ||| || ||||||||||| || |
Sbjct 2103 TACCACCACGAAGACGCAACACCAAGTGAAGAGTAGACTCTTTCTGAATATTGTAGTCGG 2044
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|| | | |||| || | ||| ||||||||||| || | | || || || | |
Sbjct 2043 CCAGAGTTCTGCCGTCCTCGAGTTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCCGGAG 1984
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| |||||||||||| || || ||||| || | || || ||| || ||||
Sbjct 1983 GGATACCTTCTTTGTCCTGGATCTTGGCTTTCACGTTGTCGATGGTGTCTGAGCTCTCAA 1924
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | ||||| |||||||| |||||||| || || || ||||||||
Sbjct 1923 CCTCGAGGGTAATGGTTTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 1875
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173
||||||||| |||||| || || ||||| |||| | | ||| |||| || | |||
Sbjct 1850 ATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCGTCCTCAAGTTG 1791
Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233
|||||||| || |||| | || ||||| | || | ||||| || || || ||
Sbjct 1790 CTTTCCGGCGAAGATTAATCTCTGCTGATCCGGAGGAATTCCTTCCTTATCTTGGATCTT 1731
Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293
||| || || | || || || ||| ||||| || | |||||||||||||| ||
Sbjct 1730 AGCCTTGACGTTGTCGATGGTGTCAGAACTCTCAACCTCGAGGGTAATAGTTTTACCAGT 1671
Query 38294 CAAGGTTTTCACGAATATCTGCAT 38317
|||||| || || || ||||||||
Sbjct 1670 CAAGGTCTTAACAAAGATCTGCAT 1647
>seq210337
Length=1863
Score = 116 bits (128), Expect = 2e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | | ||| | |||||||||||||| || || |||||||||||||| | |
Sbjct 358 CCACCACGAAGACGAAGAACCAAATGAAGAGTCGATTCTTTCTGAATATTGTAATCCGCC 417
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
||| || | || || | ||||| || || || || || | ||||| || | |||
Sbjct 418 AAAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGG 477
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| |||||||||||| |||||| ||||||||| | | ||| || || |||||
Sbjct 478 ATCCCTTCTTTGTCCTGAATTTTAGCCTTCACATTATCAATAGTGTCCGAGCTCTCAACC 537
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || |||||||| || || ||||| || ||||| || || |||||
Sbjct 538 TCCAAGGTAATAGTCTTGCCTGTCAAAGTCTTCACAAAGATTTGCAT 584
Score = 107 bits (118), Expect = 1e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| | ||| | ||||| || |||||| ||| ||||| || |||||||| |
Sbjct 1040 TACCACCTCTGAGACGAAGTACCAAGTGTAGAGTGGACTCTTTTTGGATGTTGTAATCCG 1099
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | |||| | || || | ||| || |||||||| || || | || ||||| | |
Sbjct 1100 CAAGAGTACGTCCATCTTCAAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGAG 1159
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| |||||||||||| || || ||| ||||| | || ||||| || ||||
Sbjct 1160 GGATACCTTCTTTGTCCTGGATCTTAGCCTTGACATTATCGATCGTATCGGAGCTCTCAA 1219
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | ||||| ||||| || || | || || || || || |||||
Sbjct 1220 CCTCAAGAGTAATGGTTTTCCCAGTGAGAGTCTTGACAAAGATTTGCAT 1268
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | ||||||||| | || |||||| ||| || || |||||||||||||
Sbjct 1268 TACCACCACGAAGACGCAACACAAGGTGGAGAGTGGACTCTTTCTGGATATTGTAATCAG 1327
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|| | | | | || || | || || ||||| || || || | ||| ||||| | |
Sbjct 1328 CCAGAGTCCTTCCATCTTCAAGCTGCTTACCGGCGAAGATAAGTCTTTGCTGATCCGGAG 1387
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||| |||||| || || ||| || || | | ||||||| || ||||
Sbjct 1388 GGATACCTTCCTTGTCCTGGATCTTAGCCTTGACGTTATCAATAGTATCTGAGCTCTCAA 1447
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | || || || || || |||| || || || || ||||||||
Sbjct 1448 CCTCAAGAGTGATGGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 1496
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||||||||| || | ||||| || | || |||||| || || || || ||||
Sbjct 1496 TACCACCTCTCAATCGGAGAACCAAGTGCAAGGTCGACTCCTTCTGGATGTTATAGTCAG 1555
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| ||| | || |||| |||||| ||||| || || | ||||| ||||| | |
Sbjct 1556 CCAAGGTACGGCCATCTTCTAGTTGTTTACCGGCGAAGATCAATCGTTGCTGATCCGGAG 1615
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||| |||||| || ||| ||| || || | || || || || || |
Sbjct 1616 GAATCCCTTCCTTGTCCTGGATCTTTGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCGA 1675
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | || || || || || || | |||||||||||||| |||||
Sbjct 1676 CCTCGAGAGTTATGGTCTTTCCAGTAAGCGTTTTCACGAATATTTGCAT 1724
>seq160490
Length=1974
Score = 113 bits (124), Expect = 3e-20
Identities = 71/77 (92%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 1055 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTCCACTATCGGTCTCGT 1114
Query 20007 GGTAATATTTAGCCTTA 20023
|| ||||||||||||
Sbjct 1115 GGCCGTATTTAGCCTTA 1131
>seq26661
Length=2801
Score = 113 bits (124), Expect = 3e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | |||||||||||| |||||||| ||||||||| || ||||| || |
Sbjct 1858 TACCACCACGAAGACGCAACACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCGG 1799
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | || |||| || | ||| |||||||| || || | | || || || | |
Sbjct 1798 CTAGAGTTCGACCGTCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGAG 1739
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||| |||||| |||||| ||||| || | | || ||| || || |
Sbjct 1738 GGATACCTTCCTTGTCCTGGATTTTTGCTTTCACGTTATCAATGGTGTCTGAGCTCTCGA 1679
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
| || | |||||||| || ||||||||||| || || || |||||||||
Sbjct 1678 CCTCGAGGGTAATAGTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCATG 1629
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 38108 CACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTC 38167
|||||| ||||| || |||||||| || |||||||| | ||| ||| | || ||
Sbjct 1155 CACCAAGTGAAGCGTTGATTCCTTTTGGATGTTGTAATCCGCCAAGGTACGGCCATCTTC 1096
Query 38168 TAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCAT 38227
||||| ||||| ||||| || || | || ||||| | || | ||||| ||||||
Sbjct 1095 CAATTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGAATACCTTCCTTGTCCTG 1036
Query 38228 AATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTT 38287
|| ||| ||| || || | || || || |||||| || || | || ||||| ||
Sbjct 1035 GATCTTTGCCTTAACGTTGTCGATCGTGTCAGAACTTTCCACCTCGAGGGTGATAGTCTT 976
Query 38288 ACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || | ||||||||||| ||||||||
Sbjct 975 TCCGGTGAGAGTTTTCACGAAGATCTGCAT 946
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173
|||||| || |||||| ||||| ||||| || | ||| || |||| || | |||
Sbjct 1605 ATGAAGCGTCGACTCCTTCTGAATGTTGTAGTCCGCCAAGGTTCGGCCGTCTTCAAGTTG 1546
Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233
|||||||| || || | | || ||||| | || | ||||| |||||| || ||
Sbjct 1545 CTTTCCGGCGAAGATCAATCTCTGCTGATCCGGTGGAATACCTTCCTTGTCCTGGATCTT 1486
Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293
||||| || | | || ||| ||||||||||| || ||||| || || |||||
Sbjct 1485 GGCTTTCACGTTGTCAATTGTGTCTGAGCTTTCAACTTCCAAAGTAATGGTCTTGCCCGT 1426
Query 38294 CAAGGTTTTCACGAATATCTGCAT 38317
|||||| || || || ||||||||
Sbjct 1425 CAAGGTCTTGACAAAGATCTGCAT 1402
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | |||||| ||||| || ||||| ||||| ||||| || || || |
Sbjct 2086 TACCACCACGGAGACGCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTATAGTCGG 2027
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|| ||| | || || | || || || || || || || || || || || | |
Sbjct 2026 CCAGTGTACGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGAG 1967
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | |||||||||||| ||| || ||||| || | || || ||| || || |
Sbjct 1966 GAATACCTTCTTTGTCCTGAATCTTAGCTTTCACGTTGTCGATGGTGTCTGAGCTCTCCA 1907
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | |||||||| ||||| |||||||| |||||||| || |||||
Sbjct 1906 CCTCAAGGGTAATAGTCTTACCAGTCAAGGTCTTCACGAAGATTTGCAT 1858
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||| | | ||| | ||||| || || || ||| || || || |||||||| |
Sbjct 2313 ACCACCACGGAGACGGAGGACCAAGTGGAGGGTCGACTCTTTCTGTATGTTGTAATCCGC 2254
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|| || | || || | ||||| || ||||| || || || || || || | ||
Sbjct 2253 CAGTGTGCGACCATCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGCTGGTCCGGTGG 2194
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
|| ||||| |||||| || || ||| ||||| | | || || ||| || ||
Sbjct 2193 GATCCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATTGTGTCAGAACTCTCGAC 2134
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||| | || ||||| || || || | |||||||||||||||||||||
Sbjct 2133 TTCCAGGGTGATAGTCTTGCCGGTTAGGGTTTTCACGAATATCTGCAT 2086
>seq117562
Length=2070
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | | ||| | |||||||||||||| ||| || ||||||||||| || |
Sbjct 1913 CCACCACGAAGACGAAGTACCAAATGAAGAGTCGACTCTTTCTGAATATTGTAGTCTGCT 1854
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
|| ||| | || || | ||| || |||||||| || || | || ||||| | |||
Sbjct 1853 AAGGTGCGTCCATCTTCGAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGAGGG 1794
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| ||||| |||||| ||| || ||| ||||| | | ||| || || |||||
Sbjct 1793 ATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATAGTGTCCGAGCTCTCAACC 1734
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || |||||||| || || ||||| || ||||| || || |||||
Sbjct 1733 TCCAAGGTAATAGTCTTGCCTGTCAAAGTCTTCACAAAGATTTGCAT 1687
Score = 89.7 bits (98), Expect = 3e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||||||||| || | ||||| || | || |||||| || || || || ||||
Sbjct 1231 TACCACCTCTCAATCGGAGAACCAAGTGCAAGGTCGACTCCTTCTGGATGTTATAGTCAG 1172
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| ||| | || |||| ||||| ||||| || || | ||||| ||||| | |
Sbjct 1171 CCAAGGTACGGCCATCTTCTAGCTGTTTACCGGCGAAGATCAATCGTTGCTGATCCGGAG 1112
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||| |||||| || ||| ||| || || | || || || || || |
Sbjct 1111 GAATCCCTTCCTTGTCCTGGATCTTTGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCGA 1052
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | || || || || || || | |||||||||||||| |||||
Sbjct 1051 CCTCGAGAGTTATGGTCTTTCCAGTGAGAGTTTTCACGAATATTTGCAT 1003
Score = 86.0 bits (94), Expect = 4e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 38103 CGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG 38162
|||||||| | ||||| || |||||| ||||||||||| || | | ||| |
Sbjct 1673 CGCAACACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCCGCAAGCGTACGACCA 1614
Query 38163 TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTG 38222
|| || | || || || || || || || | || ||||| | || | ||||| |||
Sbjct 1613 TCCTCGAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGATCCGGAGGAATCCCTTCCTTG 1554
Query 38223 TCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATA 38282
|| || || ||| ||||| | | || ||| || |||||||||| |||||
Sbjct 1553 TCTTGGATCTTAGCCTTGACATTGTCTATTGTGTCTGAGCTCTCAACTTCTAGAGTAATG 1494
Query 38283 GTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||| || || | ||| |||||||||||||||||
Sbjct 1493 GTTTTCCCGGTGAGGGTCTTCACGAATATCTGCAT 1459
>seq91578
Length=16840
Score = 105 bits (116), Expect = 4e-18
Identities = 163/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||| | | ||| | || | |||||| || ||||| || || ||||| || |
Sbjct 241 ACCACCACGGAGACGAAGGACGAGATGAAGTGTTGATTCCTTCTGGATGTTGTAGTCGGC 300
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
| | |||| |||| || | |||||||||||| || || | ||||||||||| | ||
Sbjct 301 GAGAGTACGTCCGTCTTCGAGTTGTTTTCCGGCGAAAATCAATCGTTGTTGATCCGGTGG 360
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
|| ||||| ||||| || || ||| ||||| | || ||||| ||||||
Sbjct 361 GATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTGTCGATCGTATCCGATGATTCAAC 420
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTT 38322
|| | || || || || ||||| | |||||||||||| |||||||| ||||
Sbjct 421 CTCGAGCGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTTT 473
>seq78792
Length=14290
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
|| ||||| || |||| || |||||||| || ||||| || || |||||||| |
Sbjct 11669 CCTCCTCTTAATCGCAGAACTAAATGAAGCGTCGATTCCTTCTGGATGTTGTAATCGGCG 11610
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| | | |||| || ||||||||||||||||| || | ||||| || || | ||
Sbjct 11609 AGTGTTCTTCCGTCTTCCAATTGTTTTCCGGCAAAGATCAAACGTTGCTGGTCCGGTGGA 11550
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| ||||| ||||| || || |||||||| | || || || | ||||||
Sbjct 11549 ATTCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATTGTGTCCGAAGATTCAACC 11490
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| || || || || ||||| | |||||||||||| ||||||||
Sbjct 11489 TCTAGGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 11443
>seq50902
Length=6384
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174
||||||||| ||| || ||||| ||||| || | || || | || || | |||
Sbjct 4558 TGAAGAGTGGACTCTTTCTGAATGTTGTAGTCCGCTAATGTCCGACCATCTTCGAGCTGT 4499
Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234
||||| ||||| ||||| | ||||| || | |||| |||||||| || ||| ||
Sbjct 4498 TTTCCCGCAAAGATTAGCCTCTGTTGGTCCGGAGGGATCCCTTCTTTATCTTGAATCTTC 4439
Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294
|||||||| | | ||||| ||||| || || | || || ||||||||||||
Sbjct 4438 GTTTTCACATTGTCAATTGTATCCGAGCTTTCGACCTCAAGAGTGATGGTTTTACCCGTC 4379
Query 38295 AAGGTTTTCACGAATATCTGCAT 38317
|| || || ||||||||||||||
Sbjct 4378 AAAGTCTTGACGAATATCTGCAT 4356
>seq153189
Length=17048
Score = 98.7 bits (108), Expect = 7e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | ||| |||||||| || | ||| |||||||||||| |||||||| |
Sbjct 14737 TACCACCACGGAGACGTAACACCAAGTGCAAAGTTGACTCCTTTTGAATGTTGTAATCCG 14678
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| || | || || | ||||| || || || || || || || || || | |
Sbjct 14677 CAAGTGTGCGACCATCCTCGAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCCGGTG 14618
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||| |||||| || || ||| || || | | || ||| || || |
Sbjct 14617 GGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCCA 14558
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | |||||||| ||||| ||||||||||| ||||| ||||||||
Sbjct 14557 CCTCGAGGGTAATAGTCTTACCAGTCAAGGTTTTGACGAAGATCTGCAT 14509
Score = 89.7 bits (98), Expect = 3e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | |||||||||||| ||||| || |||||| ||||| ||||| || |
Sbjct 14509 TACCACCACGAAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGG 14450
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| ||| | || || ||||| |||||||| || || | | || ||||| | |
Sbjct 14449 CCAAGGTGCGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCTCTGCTGATCCGGAG 14390
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||| |||||| || || || ||||| | || || || ||||| |
Sbjct 14389 GAATACCTTCCTTGTCCTGGATCTTGGCTTTAACATTGTCGATCGTGTCCGAGCTTTCCA 14330
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | || || || || || || | || || ||||| ||||||||
Sbjct 14329 CCTCGAGGGTGATTGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 14281
>seq204555
Length=10983
Score = 96.9 bits (106), Expect = 2e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174
|||||||| ||| || ||||| ||||| || | || || | || || | ||||
Sbjct 1288 TGAAGAGTTGACTCTTTCTGAATGTTGTAGTCCGCTAATGTCCGACCATCTTCGAGTTGT 1347
Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234
|| || ||||| ||||| | || || || | |||| |||||||| || ||| |||
Sbjct 1348 TTCCCCGCAAAGATTAGCCTCTGCTGGTCCGGTGGGATCCCTTCTTTATCTTGAATCTTT 1407
Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294
||| ||||| | | || ||| || |||||||| || || || |||||||| ||
Sbjct 1408 GCCTTTACATTGTCAATCGTGTCTGAGCTCTCAACTTCCAAAGTTATGGTTTTACCGGTA 1467
Query 38295 AAGGTTTTCACGAATATCTGCAT 38317
| ||| || ||||||||||||||
Sbjct 1468 AGGGTCTTAACGAATATCTGCAT 1490
>seq66861
Length=20397
Score = 96.9 bits (106), Expect = 2e-15
Identities = 139/196 (71%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186
||||| || || ||||| || | | | |||| |||| || | |||||||||||| ||
Sbjct 17450 TCCTTCTGGATGTTGTAGTCGGCGAGAGTACGTCCGTCTTCAAGTTGTTTTCCGGCGAAA 17391
Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246
|| | ||||| ||||| | |||| ||||| ||||| || || ||| |||||
Sbjct 17390 ATCAATCGTTGCTGATCCGGTGGGATTCCTTCCTTGTCTTGGATCTTCGCCTTGACATTG 17331
Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306
| || ||||| |||||| || | || || || || ||||| | ||||||||||
Sbjct 17330 TCGATCGTATCGGATGATTCAACCTCGAGCGTTATCGTCTTCCCCGTTAGGGTTTTCACG 17271
Query 38307 AATATCTGCATGTTTT 38322
|| |||||||| ||||
Sbjct 17270 AAGATCTGCATCTTTT 17255
>seq214945
Length=15579
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | | ||||||||| | ||||| || |||||||| ||||||||||| | |
Sbjct 7763 CCACCACGAAGACGCAACACAAGGTGAAGTGTTGATTCCTTTTGGATATTGTAATCGGCC 7822
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
||| ||| |||| || | ||||| |||||||| || |||| ||||| || || |||
Sbjct 7823 AAAGTACGGCCGTCCTCGAGCTGTTTACCGGCAAAGATCAGGCTTTGTTTGTCAGAAGGG 7882
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
|| |||||||| || || || ||| || || | || || || ||||| ||
Sbjct 7883 ACTCCTTCTTTCTCTTGGATCTTGGCCTTGACGTTTTCTACGGTGTCCGAGCTTTCGACC 7942
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| | | || || || || || | || || ||||| || |||||
Sbjct 7943 TCGAGGGATATGGTCTTGCCTGTAAGAGTCTTTACGAAGATTTGCAT 7989
Score = 84.2 bits (92), Expect = 1e-11
Identities = 129/184 (70%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||| ||||| || | | ||||| || ||||| |||||||| || ||||||||||
Sbjct 3470 TACCTCCTCTTAACCTGAGAACCAAGTGGAGAGTTGATTCCTTTTGGATGTTGTAATCAG 3529
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| ||| | || || | ||||| |||||||| || || | |||||| || || |
Sbjct 3530 CTAAAGTACGGCCATCTTCGAGCTGTTTACCGGCAAAGATCAGTCTTTGTTGGTCTGAAG 3589
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
|||| |||||||| | || || ||| || || | ||| || || |||||||
Sbjct 3590 GGACTCCTTCTTTCTTTTGGATCTTCAACTTGACGTTTTCGACCGTGTCGGAGCTTTCAA 3649
Query 38269 CTTC 38272
||||
Sbjct 3650 CTTC 3653
Score = 82.4 bits (90), Expect = 5e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174
||||| || ||| || |||||| ||||||||| ||| || | || |||| |||
Sbjct 7559 TGAAGTGTTGACTCTTTCTGAATACTGTAATCAGCTAAAGTCCGACCATCTTCTAGCTGT 7618
Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234
|| |||||||| ||||| | ||||| || | || | ||||||||||| || ||
Sbjct 7619 TTACCGGCAAAGATTAGCCTCTGTTGGTCAGGTGGAATCCCTTCTTTGTCTTGTATCTTC 7678
Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294
|||||| || | | ||||| || || || || | ||||| || || ||||||
Sbjct 7679 GCCTTCACGTTATCAATCGTATCCGAGCTCTCTACCTCAAGAGTAATGGTCTTCCCCGTC 7738
Query 38295 AAGGTTTTCACGAATATCTGCAT 38317
|| || || || || || |||||
Sbjct 7739 AAAGTCTTGACAAAGATTTGCAT 7761
>seq236154
Length=204
Score = 93.3 bits (102), Expect = 3e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||||| | |||||||||||| |||||||| ||||| || || ||||| || |
Sbjct 33 TACCACCTCGGAGACGCAACACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGG 92
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | ||| |||| || | ||| ||||||||||| || | |||||||| || | |
Sbjct 93 AAAGTGTGCGTCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAAACGTTGTTGGTCTGGTG 152
Query 38209 GGACGCCTTCTTTGTC 38224
||| |||||||||||
Sbjct 153 GGATACCTTCTTTGTC 168
>seq124860
Length=269
Score = 84.2 bits (92), Expect = 1e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||||||||||||||| ||||||||| |||| ||||||||| ||||||| | |
Sbjct 72 CTCTCTCTTCAAAGTTCTTTGCAACTTTCCATCACTGTACTTGTTTGCTATCGAATTTAC 131
Query 20007 GGTAATATTTAGCCTT 20022
|||||||||||||
Sbjct 132 TCCAATATTTAGCCTT 147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 333856330142468
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |