Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_008376.2 Length=34683 Score E Sequences producing significant alignments: (Bits) Value seq34241 246 7e-61 >seq34241 Length=34064 Score = 246 bits (272), Expect = 7e-61 Identities = 440/640 (69%), Gaps = 7/640 (1%) Strand=Plus/Minus Query 25486 ACCTCTTTTGTTGGATGACCGTATGAGTTTTTCCCAACAGAGATTACTGCATATTTTGGT 25545 || || || || ||||| ||||| | ||| |||||||| || || |||||||| ||| Sbjct 9515 ACTTCGTTCGTCGGATGTCCGTAAGCGTTCTTCCCAACGCTAATGACGGCATATTTCGGT 9456 Query 25546 TTAACAGCGTTCAAGAAAGCAGTACTTGTAGAAGTTTTAGCCCCATGATGGCCAACCTTA 25605 || || || | ||| | | ||| || || || || ||||||||||| || ||||| Sbjct 9455 TTGACGTACTTGAGGAACGTCGCACTCGTCGATGTCTTCGCCCCATGATGCCCGACCTTG 9396 Query 25606 AGAACATCCGCTTTCAAAGGCTGTTTAGCTTTT--ATCATGTCAGATTCAGCTTTAAATT 25663 || || ||||| ||| | || || ||| |||||||| || | ||| | || Sbjct 9395 AGGACGTCCGCACGCAACGTCTTCTT--CTTCGCAATCATGTCTTGCTCCGATTTCAGTT 9338 Query 25664 CAGCATCCCCAGTAAACAAGAAGGTATTTTTCCCGTAAGTCAATCGTAAGACAGCACTCC 25723 | || || || || |||| ||| ||||| ||| || | | | || || || |||| Sbjct 9337 CCGCGTCTCCCGTGAACAGGAAAGTATTCTTCTTATACGCGACGTGCAACACGGCGCTCC 9278 Query 25724 AGTCATTTGTATCACTTTTGCTATATGTTTTTACTGGCCCGACAAACTTAGCTGTTACTC 25783 | | || |||||| || ||| || || || ||||| |||| || | |||| Sbjct 9277 AATTGTTCAAATCACTGTTCGCATAATCCTTCACCGGTCCGACGAACTGCGCCTTCACTC 9218 Query 25784 CTTTAATTGGAAGGGTAACGTTTGCTTGTGCTGTTTTGATCGTTAGTTTTTCATTCTTTA 25843 | || | ||||| | || |||| ||||| ||||| || || || ||| ||| | Sbjct 9217 CCTTCACAGGAAGTGAGACACCCGCTTTCGCTGTCTTGATTGTCAGCTTCTCACGCTTGA 9158 Query 25844 CTGCAATGAGAAAATCCTTATACGCTTGGGAAGTATGGCTTACTTTTGGAGCATACACAC 25903 | || | | || |||||||| ||||| | || || | || ||||| ||||| |||| Sbjct 9157 CGGCTAGCAAGAAGTCCTTATAGGCTTGCGTTGTGTGTTTGACCTTTGGTGCATAGACAC 9098 Query 25904 TTTTTACCGGAAAAGCCTTAAGAACTTCGTCAAGTCCGCCGATGTGGTCAGCGTCTGGAT 25963 | || ||| ||| | | || ||||| || ||||| |||||||| || || ||||||| Sbjct 9097 TCTTGACCTTAAACGAGTCGAGGACTTCATCGAGTCCACCGATGTGATCGGCATCTGGAT 9038 Query 25964 GAGTCGCGATCATGATTTCGATGTCTTTTACCTTTTGCTTTTTAAGATAGGCGACGATAT 26023 | |||| ||||| || |||||||| ||||| || || || ||||||||||||| | Sbjct 9037 GTGTCGAGATCAACATCTCGATGTCGCCGACCTTCTGTTTCTTCAGATAGGCGACGAGCT 8978 Query 26024 CGCTGCCAT---CTTTATTTCCCCCGTCAATGAGAATGTCCTCACCATTTGGTGCCTTGA 26080 | || | |||| || || ||||| |||| |||||||||||| | || ||||| Sbjct 8977 CATCACCCTTTCCTTTGTTCCCACCGTCCATGACGATGTCCTCACCACTCGGCATCTTGA 8918 Query 26081 TATAAATACTATCTCCCTGTCCTACATTGATAAAGTGAAC 26120 | ||||| ||||||||| || | || |||| |||| || Sbjct 8917 TGTAAATCGCATCTCCCTGACCGATATCGATATAGTGGAC 8878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110512191665720