Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_008583.1 Length=43128 Score E Sequences producing significant alignments: (Bits) Value seq81513 178 4e-40 >seq81513 Length=399 Score = 178 bits (196), Expect = 4e-40 Identities = 197/260 (76%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 8043 TGGTTTAAATGCAATACATTACAAGATACCAGAAAGATAACGACGGTACTTATTCCGTCG 8102 || |||||||||| | || || |||||||| |||| |||||||| ||||||||||| Sbjct 141 TGATTTAAATGCAGCAAATCACTAGATACCAATTGGATAGCGACGGTATTTATTCCGTCG 200 Query 8103 TTGCTACTGGTGTTGAACTTGAACAAAGTCACATTG-ACTTACTAGAAAACGGATATCCA 8161 |||| |||||||||||| | ||| | ||||||| | ||||| |||| ||||| ||| Sbjct 201 TTGCCACTGGTGTTGAATTAGAAAATAGTCACACAGAACTTA-TAGATAACGGTTATAGC 259 Query 8162 CTAAAAGCAGAAGTAGAGGTTCCGGACAATAAAAAACTATCTATAGAACAACGCaaaaaa 8221 |||| || | ||| ||||| || |||||| | ||||| || ||||| ||||| Sbjct 260 TTAAACGCTAATGTAACTGTTCCAGATAATAAATTGATTTCTATTGACCAACGTAAAAAG 319 Query 8222 aTATTCGCAATGTGTAGAGATATAGAACTTCACTGGGGCGAACCAGTAGAATCAACTAGA 8281 ||||| || ||||||| |||||| ||| | ||||||| |||||||||||| || ||| Sbjct 320 ATATTTGCCATGTGTAAAGATATTGAATTGTACTGGGGAGAACCAGTAGAAGCATTAAGA 379 Query 8282 AAATTATTACAAACAGAATT 8301 || ||| |||| ||||| Sbjct 380 CAAAGATTTCAAAGTGAATT 399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137450435528240