Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_008689.1 Length=44857 Score E Sequences producing significant alignments: (Bits) Value seq81513 161 3e-35 >seq81513 Length=399 Score = 161 bits (178), Expect = 3e-35 Identities = 191/259 (74%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 9917 TGGTTTAAATGCAATACATTACAAGATACCAGAAAGACAATGACGGCACTTATTCCGTCG 9976 || |||||||||| | || || |||||||| || | ||||| | ||||||||||| Sbjct 141 TGATTTAAATGCAGCAAATCACTAGATACCAATTGGATAGCGACGGTATTTATTCCGTCG 200 Query 9977 TTGCTACTGGTGTTGAACTTGAACAAAGTCACATTGACTTGCTAGAAAACGGATATCCAC 10036 |||| |||||||||||| | ||| | ||||||| || | |||| ||||| ||| Sbjct 201 TTGCCACTGGTGTTGAATTAGAAAATAGTCACACAGAACTTATAGATAACGGTTATAGCT 260 Query 10037 TAAAAGCAGAAGTAGAGGTTCCGGACAATAAAAAGTTATCTATAGAACAACGCaaaaaaa 10096 |||| || | ||| ||||| || |||||| | | ||||| || ||||| ||||| | Sbjct 261 TAAACGCTAATGTAACTGTTCCAGATAATAAATTGATTTCTATTGACCAACGTAAAAAGA 320 Query 10097 TATTCGCAATGTGTAGAGATATAGAACTTCACTGGGGCGAACCAGTGGAATCAACTAGAA 10156 |||| || ||||||| |||||| ||| | ||||||| |||||||| ||| || ||| Sbjct 321 TATTTGCCATGTGTAAAGATATTGAATTGTACTGGGGAGAACCAGTAGAAGCATTAAGAC 380 Query 10157 AATTATTACAAACAGAATT 10175 || ||| |||| ||||| Sbjct 381 AAAGATTTCAAAGTGAATT 399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142965678114184