Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_008798.1 Length=43265 Score E Sequences producing significant alignments: (Bits) Value seq81513 168 2e-37 >seq81513 Length=399 Score = 168 bits (186), Expect = 2e-37 Identities = 195/260 (75%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 8642 TGGTTTAAATGCAATACATTACAAGATACCAGAAAGACAATGACGGCACTTATTCCGTCG 8701 || |||||||||| | || || |||||||| || | ||||| | ||||||||||| Sbjct 141 TGATTTAAATGCAGCAAATCACTAGATACCAATTGGATAGCGACGGTATTTATTCCGTCG 200 Query 8702 TTGCTACTGGTGTTGAACTTGAACAAAGTCACATTG-ACTTACTAGAAAACGGATATCCA 8760 |||| |||||||||||| | ||| | ||||||| | ||||| |||| ||||| ||| Sbjct 201 TTGCCACTGGTGTTGAATTAGAAAATAGTCACACAGAACTTA-TAGATAACGGTTATAGC 259 Query 8761 CTAAAAGCAGAAGTAGAGGTTCCGGATAATAAAAAACTATCTATAGAACAACGCaaaaaa 8820 |||| || | ||| ||||| ||||||||| | ||||| || ||||| ||||| Sbjct 260 TTAAACGCTAATGTAACTGTTCCAGATAATAAATTGATTTCTATTGACCAACGTAAAAAG 319 Query 8821 aTATTCGCAATGTGTAGAGATATAGAACTTCACTGGGGAGAACCGGTGGAATCAATTAGA 8880 ||||| || ||||||| |||||| ||| | ||||||||||||| || ||| || | ||| Sbjct 320 ATATTTGCCATGTGTAAAGATATTGAATTGTACTGGGGAGAACCAGTAGAAGCATTAAGA 379 Query 8881 AAATTATTACAAACAGAATT 8900 || ||| |||| ||||| Sbjct 380 CAAAGATTTCAAAGTGAATT 399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137887444339272