Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_009810.1 Length=38867 Score E Sequences producing significant alignments: (Bits) Value seq260187 95.1 3e-15 >seq260187 Length=34880 Score = 95.1 bits (104), Expect = 3e-15 Identities = 131/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 35596 AGAAGCAGATTTCATTAATTGTGTTGTTTGGCGTAAACCAGCGGAAAACGCAGCTAATTT 35655 |||||| || ||||| |||| || |||||||| || | ||| || |||| ||| | | Sbjct 22303 AGAAGCTGACTTCATCGATTGCGTCGTTTGGCGCAAGCAAGCAGAGAACGTTGCTCAGTA 22362 Query 35656 CTTGAAAAAAGGAAGCATGGCAGGCGTTGATGGACGTGTTCAAACTCGTAATTATGAGGA 35715 ||||||||||| ||| | ||||| ||||| || || |||| | | ||| ||||| || Sbjct 22363 TTTGAAAAAAGGGAGCCTTGCAGGTGTTGAGGGTCGCCTTCAGATTAGTAGCTATGACGA 22422 Query 35716 CAGCGACGGTAAACG-CGTTTTCGTTACTGAGGTAGTTGCTGAAACAGTTCAATTCTTAG 35774 | || ||| |||| |||| ||| | | || || || || || | |||| |||| ||| Sbjct 22423 TAAAGATGGTCAACGTCGTTATCG-TGCAGAAGTCGTCGCGGATAGTGTTCGATTCCTAG 22481 Query 35775 A 35775 | Sbjct 22482 A 22482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123858504551544