Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_009813.1 Length=48172 Score E Sequences producing significant alignments: (Bits) Value seq31995 80.6 8e-11 >seq31995 Length=327 Score = 80.6 bits (88), Expect = 8e-11 Identities = 112/157 (71%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 44409 TAAACAGTCGTGAAGTTGCTGAAATGGTAGAAAAAAGACACTCTGATTTACTGCGTGATA 44468 || ||||||| ||||| || ||||||||||| ||||||||| || ||||| | | |||| Sbjct 159 TAGACAGTCGAGAAGTAGCAGAAATGGTAGAGAAAAGACACGCTCATTTAGTTAGGGATA 100 Query 44469 TCGAAACATATATTAGATATATCAATCAAAACGCAAAATTGCGTTCTGATGATTTTTTCA 44528 | || | ||| | | | ||||||| |||| ||| |||||||||||| || | Sbjct 99 TTGAGAATTATCAAAACGCTTTAGGTCAAAACCCAAATTTGGTTTCTGATGATTTCTTTA 40 Query 44529 GTGAATCTACTTATCATGCCGGCACTGGGAAAGAATA 44565 ||| | ||||| || || || || ||| |||| Sbjct 39 TAGAAAGCAGCTATCAAGCTGGTACAGGCAAACAATA 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153540015403024