Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_009815.1 Length=38124 Score E Sequences producing significant alignments: (Bits) Value seq260187 113 1e-20 >seq260187 Length=34880 Score = 113 bits (124), Expect = 1e-20 Identities = 137/184 (74%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 35047 CGAGAAGCAGATTTCATTAATTGTGTTGTTTGGCGCAAACCAGCAGAAAACGTTGCTAAT 35106 |||||||| || ||||| |||| || ||||||||||| | |||||| ||||||||| | Sbjct 22301 CGAGAAGCTGACTTCATCGATTGCGTCGTTTGGCGCAAGCAAGCAGAGAACGTTGCTCAG 22360 Query 35107 TTCTTGAAGAAAGGAAGCATGGCGGGCGTTGATGGACGTGTTCAAACTCGTAATTATGAG 35166 | ||||| ||||| ||| | || || ||||| || || |||| | | ||| ||||| Sbjct 22361 TATTTGAAAAAAGGGAGCCTTGCAGGTGTTGAGGGTCGCCTTCAGATTAGTAGCTATGAC 22420 Query 35167 GATAACGACGGTAAACGT-GTTTTCGTTACTGAGGTAGTTGCTGAATCAGTTCAATTCTT 35225 ||||| || ||| ||||| ||| ||| | | || || || || || |||| |||| | Sbjct 22421 GATAAAGATGGTCAACGTCGTTATCG-TGCAGAAGTCGTCGCGGATAGTGTTCGATTCCT 22479 Query 35226 AGAA 35229 |||| Sbjct 22480 AGAA 22483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121488449466896