Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq135588 145 3e-30 >seq135588 Length=264 Score = 145 bits (160), Expect = 3e-30 Identities = 164/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 60077 GATGTCATAAGGAGAGAATAGGGCCATAGGCTCGCTCTCCTTGGCAAGGCGGAACGTGAC 60136 || |||||| || ||| ||| ||| |||| | |||||| || ||| |||| Sbjct 227 GACGTCATACGGGCTGAAGAGGTACATGTCCTCGTTGCGCTTGGCCAGTTCGAAGGTGAT 168 Query 60137 ATCAGGAACGATAACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCGGCGTTTTC 60196 || || | || || || ||||| || ||||| || |||||||||||||||||||| || Sbjct 167 GTCGGGGATGACGACGCCAAGGGACAGCGTCTTGATCCGGATCTTCTCGTCGGCGTTCTC 108 Query 60197 ACGCTTGGTATCCAGGAACGCAAGGATGTCGGGGTGGTGTGCGTTCAAATATACCGCCCC 60256 |||||||| || |||||| ||||||||||||||| |||| || || || || || Sbjct 107 GCGCTTGGTGTCGAGGAACTTGTAGATGTCGGGGTGGTGAGCGTGCAGGTACACGGCACC 48 Query 60257 TGCGCCCTGCCTTGCACCCAGTTGGTTAGAGTAGGAGAAG 60296 || ||||| | ||||||||| ||||| | |||||||||| Sbjct 47 GGCACCCTGTCGTGCACCCAGCTGGTTGGCGTAGGAGAAG 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 224992839738320