Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq26664 194 4e-44
seq167623 185 2e-41
seq91578 176 1e-38
seq66861 176 1e-38
seq78792 141 2e-28
seq26661 136 9e-27
seq50902 129 1e-24
seq117562 123 6e-23
seq210337 122 2e-22
seq153189 122 2e-22
seq54724 116 9e-21
seq214945 107 5e-18
seq236154 104 5e-17
seq204555 102 2e-16
seq224638 95.1 3e-14
seq46463 95.1 3e-14
seq146431 87.8 4e-12
>seq26664
Length=6282
Score = 194 bits (214), Expect = 4e-44
Identities = 179/227 (79%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| |||||||||| ||| ||| || ||||| || |||||||||
Sbjct 5646 CCACCACGGAGACGAAGCACGAGATGAAGCGTTGATTCCTTCTGGATGTTGTAGTCGGCG 5705
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || ||||||||||| | ||||||||| |||||||||| ||||| || ||||
Sbjct 5706 AGAGTACGTCCGTCTTCGAGTTGTTTTCCCGCGAAGATCAATCGCTGCTGGTCCGGTGGG 5765
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| || || ||||| |||||||| || || || || | |||| ||||| ||
Sbjct 5766 ATTCCTTCCTTGTCTTGGATCTTCGCTTTGACATTGTCGATGGTATCGGATGATTCGACC 5825
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| || |||||||||||||| || || || ||||| ||||||||
Sbjct 5826 TCGAGAGTTATCGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCAT 5872
>seq167623
Length=7090
Score = 185 bits (204), Expect = 2e-41
Identities = 177/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| |||||||||| ||| ||| || ||||| || || ||||||
Sbjct 2619 CCACCACGGAGACGAAGGACGAGATGAAGCGTCGATTCCTTCTGGATGTTGTAATCGGCG 2560
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || |||||||| | ||||||||| ||||| |||| ||||| ||| ||||
Sbjct 2559 AGAGTACGGCCGTCTTCGAGTTGTTTTCCGGCGAAAATCAATCGCTGCTGATCCGGTGGG 2500
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| || || ||||| |||||||| || || || || | |||| ||||| ||
Sbjct 2499 ATTCCTTCCTTGTCTTGGATCTTCGCTTTGACATTGTCGATGGTATCGGATGATTCGACC 2440
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| || |||||||||||||| || || || ||||| ||||||||
Sbjct 2439 TCGAGAGTTATCGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCAT 2393
>seq91578
Length=16840
Score = 176 bits (194), Expect = 1e-38
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| |||||||||| || ||| || ||||| || |||||||||
Sbjct 242 CCACCACGGAGACGAAGGACGAGATGAAGTGTTGATTCCTTCTGGATGTTGTAGTCGGCG 301
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || ||||||||||| | ||||||||| ||||| |||| || |||||| ||||
Sbjct 302 AGAGTACGTCCGTCTTCGAGTTGTTTTCCGGCGAAAATCAATCGTTGTTGATCCGGTGGG 361
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| || || ||||| || || || || || || || | ||| ||||| ||
Sbjct 362 ATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTGTCGATCGTATCCGATGATTCAACC 421
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|||||||| ||||||||||| || || || || ||||| ||||||||
Sbjct 422 TCGAGCGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 468
>seq66861
Length=20397
Score = 176 bits (194), Expect = 1e-38
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || || |||| ||| ||| || ||||| || |||||||||
Sbjct 17486 CCACCACGGAGACGAAGGACAAGGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCG 17427
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || ||||||||||| | ||||||||| ||||| |||| || || ||| ||||
Sbjct 17426 AGAGTACGTCCGTCTTCAAGTTGTTTTCCGGCGAAAATCAATCGTTGCTGATCCGGTGGG 17367
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| || || ||||| ||||| || || || || || | |||| ||||| ||
Sbjct 17366 ATTCCTTCCTTGTCTTGGATCTTCGCCTTGACATTGTCGATCGTATCGGATGATTCAACC 17307
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|||||||| ||||||||||| || || || || ||||| ||||||||
Sbjct 17306 TCGAGCGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 17260
>seq78792
Length=14290
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321
|| || | ||||| ||| ||| || ||||| || || |||||||| || | |||||||
Sbjct 11654 AGAACTAAATGAAGCGTCGATTCCTTCTGGATGTTGTAATCGGCGAGTGTTCTTCCGTCT 11595
Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381
|| ||||||||||| || ||||||| ||| || || ||| |||||||| || ||
Sbjct 11594 TCCAATTGTTTTCCGGCAAAGATCAAACGTTGCTGGTCCGGTGGAATTCCTTCCTTGTCT 11535
Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441
||||| ||||||||||| || || || | || ||||| || || || || || |||
Sbjct 11534 TGGATCTTCGCTTTCACATTGTCGATTGTGTCCGAAGATTCAACCTCTAGGGTTATTGTC 11475
Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||||| || || || || ||||| |||||||||
Sbjct 11474 TTCCCCGTTAGGGTTTTCACGAAGATCTGCATT 11442
>seq26661
Length=2801
Score = 136 bits (150), Expect = 9e-27
Identities = 169/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || || || || || |||||||||| || || |||||||| || |||||||||
Sbjct 1400 CCTCCACGAAGCCTGAGGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCG 1341
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || ||||| || | ||| ||||| |||||||||| | ||| || |||
Sbjct 1340 AGAGTACGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGA 1281
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|||||||| || |||||||| || || || || || || || | || ||| ||
Sbjct 1280 ATTCCTTCCTTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTGTCAGAACTC---TCA 1224
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| || |||||||| || |||| |||||||||||| ||||||||
Sbjct 1223 ACCTCGAGGGTAATCGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 1174
Score = 131 bits (144), Expect = 4e-25
Identities = 146/194 (75%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || |||||||| || || || |||||||| | ||| ||||| ||||||
Sbjct 1820 TCCTTTTGGATGTTGTAGTCGGCTAGAGTTCGACCGTCTTCAAGTTGCTTTCCGGCGAAG 1761
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| | ||| || ||||| ||||| || ||||||||||| |||||||||||
Sbjct 1760 ATCAATCTCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATTTTTGCTTTCACGTTA 1701
Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || | || |||| || || ||||| || || ||||| || |||| ||||||
Sbjct 1700 TCAATGGTGTCTGAGCTC---TCGACCTCGAGGGTAATAGTCTTGCCCGTCAAGGTCTTG 1644
Query 288460 ACGAATATCTGCAT 288473
|| || ||||||||
Sbjct 1643 ACAAAGATCTGCAT 1630
Score = 123 bits (136), Expect = 6e-23
Identities = 170/235 (72%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || || || || || || |||||||||| ||| || || || || || ||||
Sbjct 1632 CATG-CCTCCACGAAGCCTGAGGACGAGATGAAGCGTCGACTCCTTCTGAATGTTGTAGT 1574
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| || | || || |||||||| | ||| ||||| |||||||||| | ||| |||
Sbjct 1573 CCGCCAAGGTTCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGATCCG 1514
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418
||| || ||||| || |||||||| || ||||||||||| || || | || |||
Sbjct 1513 GTGGAATACCTTCCTTGTCCTGGATCTTGGCTTTCACGTTGTCAATTGTGTCTGAGCT-- 1456
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||| ||||| | || || ||||| || |||| |||||||| || ||||||||
Sbjct 1455 -TTCAACTTCCAAAGTAATGGTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 1402
Score = 104 bits (114), Expect = 5e-17
Identities = 140/194 (72%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| || || || || || || || ||||| || || || | ||||| || || |||
Sbjct 2276 TCTTTCTGTATGTTGTAATCCGCCAGTGTGCGACCATCCTCGAGCTGTTTACCAGCAAAG 2217
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| |||||||| || |||||| ||||| || |||||||| || || || || ||
Sbjct 2216 ATGAGACGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACATTG 2157
Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || | || ||| || ||||| || ||||| ||||| ||||| || || ||
Sbjct 2156 TCAATTGTGTCAGAACTC---TCGACTTCCAGGGTGATAGTCTTGCCGGTTAGGGTTTTC 2100
Query 288460 ACGAATATCTGCAT 288473
||||||||||||||
Sbjct 2099 ACGAATATCTGCAT 2086
Score = 100 bits (110), Expect = 7e-16
Identities = 140/195 (72%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || || || ||||||||||| || || || || || || | || || || |||||
Sbjct 2049 TTCCTTCTGAATGTTATAGTCGGCCAGTGTACGGCCATCCTCGAGCTGCTTACCAGCGAA 1990
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| |||||||| || || || |||||||| ||||| || || |||||||||||
Sbjct 1989 GATGAGACGCTGCTGGTCCGGAGGAATACCTTCTTTGTCCTGAATCTTAGCTTTCACGTT 1930
Query 288402 TTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| || | || |||| || || || || || || ||||| || |||| |||||
Sbjct 1929 GTCGATGGTGTCTGAGCTC---TCCACCTCAAGGGTAATAGTCTTACCAGTCAAGGTCTT 1873
Query 288459 GACGAATATCTGCAT 288473
||||| || |||||
Sbjct 1872 CACGAAGATTTGCAT 1858
>seq50902
Length=6384
Score = 129 bits (142), Expect = 1e-24
Identities = 168/231 (73%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| ||||| | || || || |||| ||| ||||| || || || ||||| ||
Sbjct 4583 TCCACCACGGAGACGGAGAACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCCGC 4524
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| || || || ||||| | |||||||| || ||||| || | |||||| ||
Sbjct 4523 TAATGTCCGACCATCTTCGAGCTGTTTTCCCGCAAAGATTAGCCTCTGTTGGTCCGGAGG 4464
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA---TTC 288422
||| ||||||||||| || || |||| |||||| || || || | ||| ||| |||
Sbjct 4463 GATCCCTTCTTTATCTTGAATCTTCGTTTTCACATTGTCAATTGTATC---CGAGCTTTC 4407
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| || || || |||| |||||||||||||||||||||
Sbjct 4406 GACCTCAAGAGTGATGGTTTTACCCGTCAAAGTCTTGACGAATATCTGCAT 4356
>seq117562
Length=2070
Score = 123 bits (136), Expect = 6e-23
Identities = 166/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||| | ||| || ||||| | || || || ||||| || || || ||
Sbjct 1457 CCACCTCTGAGACGAAGCACAAGATGGAGTGTAGACTCCTTCTGGATGTTGTAATCCGCC 1398
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | ||||||||| | || || || |||||||| || | || ||| ||
Sbjct 1397 AGAGTCCTTCCGTCTTCAAGCTGCTTACCGGCGAAGATAAGTCTTTGCTGATCCGGAGGA 1338
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| ||||| || |||||||| || ||||| ||||| || |||| ||| ||| |||
Sbjct 1337 ATACCTTCCTTGTCCTGGATCTTAGCTTTGACGTTATCAATAGTATCTGAGCT---TTCG 1281
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|||||||| || || ||||| ||||||| |||||||||||| || |||||
Sbjct 1280 ACTTCGAGGGTAATGGTCTTTCCGGTCAAAGTCTTGACGAAGATTTGCAT 1231
Score = 98.7 bits (108), Expect = 2e-15
Identities = 139/194 (72%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || ||||| ||||| || ||||| || || || || | || || || ||||||
Sbjct 1649 TCCTTCTGAATATTGTAGTCCGCAAGCGTACGACCATCCTCGAGCTGCTTACCAGCGAAG 1590
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| ||| || || ||||| || || ||||| || || || || ||
Sbjct 1589 ATGAGTCTCTGCTGATCCGGAGGAATCCCTTCCTTGTCTTGGATCTTAGCCTTGACATTG 1530
Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
||||| | || |||| || ||||| || || || || |||||||| || |||||
Sbjct 1529 TCTATTGTGTCTGAGCTC---TCAACTTCTAGAGTAATGGTTTTCCCGGTGAGGGTCTTC 1473
Query 288460 ACGAATATCTGCAT 288473
||||||||||||||
Sbjct 1472 ACGAATATCTGCAT 1459
>seq210337
Length=1863
Score = 122 bits (134), Expect = 2e-22
Identities = 144/194 (74%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| |||||||| || || || || || | ||| ||||| | || || || ||||||
Sbjct 1306 TCTTTCTGGATATTGTAATCAGCCAGAGTCCTTCCATCTTCAAGCTGCTTACCGGCGAAG 1365
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | || ||| ||||| ||||| || |||||||| || || || |||||
Sbjct 1366 ATAAGTCTTTGCTGATCCGGAGGGATACCTTCCTTGTCCTGGATCTTAGCCTTGACGTTA 1425
Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| |||| ||| |||| || || || || ||||| ||||| |||||||||||||||
Sbjct 1426 TCAATAGTATCTGAGCTC---TCAACCTCAAGAGTGATGGTCTTTCCGGTCAGAGTCTTG 1482
Query 288460 ACGAATATCTGCAT 288473
|| || ||||||||
Sbjct 1483 ACAAAGATCTGCAT 1496
Score = 114 bits (126), Expect = 3e-20
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||| | |||||| | || | ||| ||||||||||| || || || ||
Sbjct 1042 CCACCTCTGAGACGAAGTACCAAGTGTAGAGTGGACTCTTTTTGGATGTTGTAATCCGCA 1101
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || ||||| ||||| | ||| || || || ||||| || | ||| ||| |||
Sbjct 1102 AGAGTACGTCCATCTTCAAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGAGGG 1161
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| |||||||| |||||||| || || || || || || || | ||| |||| ||
Sbjct 1162 ATACCTTCTTTGTCCTGGATCTTAGCCTTGACATTATCGATCGTATCGGAGCTC---TCA 1218
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || || || ||||| || ||||||||||| || || |||||
Sbjct 1219 ACCTCAAGAGTAATGGTTTTCCCAGTGAGAGTCTTGACAAAGATTTGCAT 1268
>seq153189
Length=17048
Score = 122 bits (134), Expect = 2e-22
Identities = 144/194 (74%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| ||||| || || || || || || ||||| || || || | ||||| || ||||||
Sbjct 14927 TCCTTTTGAATGTTGTAATCCGCAAGTGTGCGACCATCCTCGAGCTGTTTACCAGCGAAG 14868
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| |||||||| || |||||| ||||| || |||||||| || || || |||||
Sbjct 14867 ATGAGACGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG 14808
Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || | || |||| || ||||| || ||||| ||||| || || |||||||||
Sbjct 14807 TCAATGGTGTCAGAGCTC---TCGACTTCAAGGGTGATTGTCTTGCCAGTAAGAGTCTTG 14751
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 14750 ACGAAAATCTGCAT 14737
>seq54724
Length=7877
Score = 116 bits (128), Expect = 9e-21
Identities = 143/194 (74%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| || ||||| |||||||| || || | ||||| || | ||| ||||| || |||
Sbjct 2065 TCTTTCTGAATATTGTAGTCGGCCAGAGTTCTGCCGTCCTCGAGTTGCTTTCCGGCAAAG 2006
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| | ||| || ||||| |||||||| |||||||| || |||||||||||
Sbjct 2005 ATCAATCTCTGCTGGTCCGGAGGGATACCTTCTTTGTCCTGGATCTTGGCTTTCACGTTG 1946
Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || | || |||| || || ||||| || || || || ||||||| ||||||
Sbjct 1945 TCGATGGTGTCTGAGCTC---TCAACCTCGAGGGTAATGGTTTTACCGGTCAAGGTCTTG 1889
Query 288460 ACGAATATCTGCAT 288473
|| || ||||||||
Sbjct 1888 ACAAAGATCTGCAT 1875
>seq214945
Length=15579
Score = 107 bits (118), Expect = 5e-18
Identities = 144/198 (73%), Gaps = 12/198 (6%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||||||||| || ||||| | || || ||||| || | ||||| || || ||
Sbjct 7798 TTCCTTTTGGATATTGTAATCGGCCAAAGTACGGCCGTCCTCGAGCTGTTTACCGGCAAA 7857
Query 288342 GATCAGACGCTGT---TGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
|||||| | ||| | |||| |||| ||||||||| || ||||| || || || ||
Sbjct 7858 GATCAGGCTTTGTTTGTCAGAA---GGGACTCCTTCTTTCTCTTGGATCTTGGCCTTGAC 7914
Query 288399 GTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGT 288455
|||||||| | || ||| ||| || ||||| | || ||||| || || |||||
Sbjct 7915 GTTTTCTACGGTGTCCGAGCT---TTCGACCTCGAGGGATATGGTCTTGCCTGTAAGAGT 7971
Query 288456 CTTGACGAATATCTGCAT 288473
||| ||||| || |||||
Sbjct 7972 CTTTACGAAGATTTGCAT 7989
>seq236154
Length=204
Score = 104 bits (114), Expect = 5e-17
Identities = 102/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || ||||| || ||||||| || |||||||||||||| | ||| ||||| || ||
Sbjct 70 TTCCTTCTGGATGTTGTAGTCGGAAAGTGTGCGTCCGTCTTCAAGTTGCTTTCCGGCAAA 129
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||| ||| ||||| |||||| |||||||| || ||||| || || || || ||
Sbjct 130 GATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTGTCTTGGATCTTGGCCTTAACATT 189
Query 288402 TTCTATAGAATC 288413
||| || |||||
Sbjct 190 TTCAATGGAATC 201
>seq204555
Length=10983
Score = 102 bits (112), Expect = 2e-16
Identities = 162/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| ||||| | || || || |||| || ||||| || || || ||||| ||
Sbjct 1263 TCCACCACGGAGACGGAGAACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCCGC 1322
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| || || || ||||| | |||||| || || ||||| || | ||| || |||
Sbjct 1323 TAATGTCCGACCATCTTCGAGTTGTTTCCCCGCAAAGATTAGCCTCTGCTGGTCCGGTGG 1382
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422
||| ||||||||||| || || || || || || || || || | || |||| ||
Sbjct 1383 GATCCCTTCTTTATCTTGAATCTTTGCCTTTACATTGTCAATCGTGTCTGAGCTC---TC 1439
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| | || || || || ||||| || ||||| ||||||||||||||
Sbjct 1440 AACTTCCAAAGTTATGGTTTTACCGGTAAGGGTCTTAACGAATATCTGCAT 1490
>seq224638
Length=5969
Score = 95.1 bits (104), Expect = 3e-14
Identities = 139/194 (72%), Gaps = 7/194 (4%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| || || || || || || | || || || ||||| | |||||||| || |||
Sbjct 3359 TCTTTCTGAATGTTGTAATCCGCTAATGTCCGACCATCTTCGAGCTGTTTTCCCGCAAAG 3418
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || ||||| | ||||||||| || || ||||| ||||| ||
Sbjct 3419 ATTAGCCTCTGCTGGTCCGGAGGGATCCTTTCTTTATCTTGAATCTTCGCCTTCACATTG 3478
Query 288403 TCTATAGAATCGCTCGA---TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || | ||| ||| ||| || || || ||||||||||| || |||| |||||||
Sbjct 3479 TCAATCGTATC---CGAGCTTTCGACCTCAAGAGTGATCGTCTTTCCCGTCAAAGTCTTG 3535
Query 288460 ACGAATATCTGCAT 288473
|| |||||||||
Sbjct 3536 GCG-TTATCTGCAT 3548
>seq46463
Length=250
Score = 95.1 bits (104), Expect = 3e-14
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 288363 TGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
|||||||||||| || || |||||||| |||||||| ||||| ||||| || |||||
Sbjct 1 TGGGATTCCTTCCTTGTCTTGGATTTTAGCTTTCACATTTTCAATAGAGTCCGAAGATTC 60
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|||||| | ||||| || || || || ||||| || || || || ||||||
Sbjct 61 TACTTCCAAAGTGATGGTTTTGCCAGTTAGAGTTTTCACAAAAATTTGCATT 112
>seq146431
Length=15796
Score = 87.8 bits (96), Expect = 4e-12
Identities = 137/193 (71%), Gaps = 5/193 (3%)
Strand=Plus/Minus
Query 268461 GTTTCCCATTCAATATCATGATCTGTGGAACATGTACAAGAAGGCAGTGGCAACCTTTTG 268520
|||||| ||||| || | | | ||| | ||||||||||| || | ||| |||| ||
Sbjct 4700 GTTTCCGATTCACTACCCACAGATCTGGGAGATGTACAAGAAAGCCGAAGCATCCTTCTG 4641
Query 268521 GACCACCGAGGAAGTTCCTCTTAACGCA-GACGTTGCAGACTGGCGTGAGAAACTGAACA 268579
|||| |||| ||||| ||| | | || |||| |||||| || || || |||
Sbjct 4640 GACCGCCGAAGAAGTAGATCT-ATCACAAGACGGACGTGACTGG---GAAAATCTCAACG 4585
Query 268580 ACGATGAACGACACTTCATCAAACATATTCTGGGGTTCTTTGCAGGCTCCGACGGTATCG 268639
||| ||||| |||||||||||||| | || | ||||| || | || ||||| ||||
Sbjct 4584 ACGGAGAACGTCACTTCATCAAACACGTCCTCGCCTTCTTCGCCGCATCTGACGGAATCG 4525
Query 268640 TGATGGAAAATCT 268652
| | ||||||||
Sbjct 4524 TCCTCGAAAATCT 4512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1175615429960584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |