Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_010105.1
Length=170523
Score E
Sequences producing significant alignments: (Bits) Value
seq249645 122 9e-23
>seq249645
Length=476466
Score = 122 bits (134), Expect = 9e-23
Identities = 271/403 (67%), Gaps = 8/403 (2%)
Strand=Plus/Minus
Query 141933 GTTTAACTGGATTCCGTAGTCCATATGACGAATACGGTTCTCATCGACACCTTTGTTGTT 141992
||||||||| | ||||||||||||||||| | |||||| || || ||||| ||| ||
Sbjct 264957 GTTTAACTGTACGCCGTAGTCCATATGACGGACACGGTTGTCTTCAACACCGCGGTTATT 264898
Query 141993 TTTCAAAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 142052
||| | || || | |||||||| |||||||| | || || | || |||||
Sbjct 264897 TTTGAGTACCAGTAATGACTCAACTTCTAAATGCCATAGTGGGTAGAACAACGTCGCAGC 264838
Query 142053 GCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAA 142112
|||||||| | ||||||||||| || ||||||| || || ||||| ||| | ||
Sbjct 264837 ACCGCCACGTACGCCACCTTGTGAGCAGCATTTAACGGCCGTTTGGAACAATTTATAAAA 264778
Query 142113 TGGAATAACACCGGTATGTTTGACTTCACCCATGCCA---ATACGAGAACCTTCAGCACG 142169
|||||| || ||||| | ||||||| |||| ||| | ||| |||||
Sbjct 264777 AGGAATACAGCCAGTATGCTGTGCTTCACC---GCCACGGATAGGGCTACCAAGGGCACG 264721
Query 142170 AATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTATTCAATTATTGAGTT 142229
|| ||| ||||||| || ||||| ||||| | || | || | || | | |
Sbjct 264720 GATACGACCTGCGTTGATGCCGATACCAGCACGCTGTGACACATAGCGTACGATGGCGCT 264661
Query 142230 GGCAGTTTTGTTAATAGA-TTTCAGCGAGTCGCCTGCTTCAATAACCACACAAGAACTAA 142288
| || ||| ||||| | | ||| | || || ||| || | || || || ||||
Sbjct 264660 AGTGGTGGCGTTGATAGAGTCTAAGCTA-TCACCACATTCGATTAAGACGCACGAGCTAA 264602
Query 142289 ATTGACGAGTTGGAGTACGTGCACCAGCCATAATAGGAGTAGG 142331
| ||||| | ||| ||||| |||| | ||| || || || ||
Sbjct 264601 ACTGACGCGATGGCGTACGCACACCTGACATGATTGGCGTTGG 264559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543723286755040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |