Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_010105.1 Length=170523 Score E Sequences producing significant alignments: (Bits) Value seq249645 122 9e-23 >seq249645 Length=476466 Score = 122 bits (134), Expect = 9e-23 Identities = 271/403 (67%), Gaps = 8/403 (2%) Strand=Plus/Minus Query 141933 GTTTAACTGGATTCCGTAGTCCATATGACGAATACGGTTCTCATCGACACCTTTGTTGTT 141992 ||||||||| | ||||||||||||||||| | |||||| || || ||||| ||| || Sbjct 264957 GTTTAACTGTACGCCGTAGTCCATATGACGGACACGGTTGTCTTCAACACCGCGGTTATT 264898 Query 141993 TTTCAAAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 142052 ||| | || || | |||||||| |||||||| | || || | || ||||| Sbjct 264897 TTTGAGTACCAGTAATGACTCAACTTCTAAATGCCATAGTGGGTAGAACAACGTCGCAGC 264838 Query 142053 GCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAA 142112 |||||||| | ||||||||||| || ||||||| || || ||||| ||| | || Sbjct 264837 ACCGCCACGTACGCCACCTTGTGAGCAGCATTTAACGGCCGTTTGGAACAATTTATAAAA 264778 Query 142113 TGGAATAACACCGGTATGTTTGACTTCACCCATGCCA---ATACGAGAACCTTCAGCACG 142169 |||||| || ||||| | ||||||| |||| ||| | ||| ||||| Sbjct 264777 AGGAATACAGCCAGTATGCTGTGCTTCACC---GCCACGGATAGGGCTACCAAGGGCACG 264721 Query 142170 AATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTATTCAATTATTGAGTT 142229 || ||| ||||||| || ||||| ||||| | || | || | || | | | Sbjct 264720 GATACGACCTGCGTTGATGCCGATACCAGCACGCTGTGACACATAGCGTACGATGGCGCT 264661 Query 142230 GGCAGTTTTGTTAATAGA-TTTCAGCGAGTCGCCTGCTTCAATAACCACACAAGAACTAA 142288 | || ||| ||||| | | ||| | || || ||| || | || || || |||| Sbjct 264660 AGTGGTGGCGTTGATAGAGTCTAAGCTA-TCACCACATTCGATTAAGACGCACGAGCTAA 264602 Query 142289 ATTGACGAGTTGGAGTACGTGCACCAGCCATAATAGGAGTAGG 142331 | ||||| | ||| ||||| |||| | ||| || || || || Sbjct 264601 ACTGACGCGATGGCGTACGCACACCTGACATGATTGGCGTTGG 264559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543723286755040