Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_010147.1 Length=43011 Score E Sequences producing significant alignments: (Bits) Value seq31995 107 5e-19 >seq31995 Length=327 Score = 107 bits (118), Expect = 5e-19 Identities = 139/191 (73%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 3140 AGGAGGAAACTGAAATGCAAGCATTACAAATAGTAGAACAGAACGAAACACATTATGTAG 3199 |||||||| ||||||||||| ||||||||| ||||||| ||| | | |||||||| Sbjct 215 AGGAGGAAT-TGAAATGCAAGAATTACAAATTTTAGAACAAAACAACAGTTTTTATGTAG 157 Query 3200 ACAGTAGAGAAGTTGCGGAAATGATAGGAAAGCGACACGACAATTTAGTAAGAGACATTA 3259 ||||| ||||||| || |||||| ||| || |||||| ||||||| || || ||| Sbjct 156 ACAGTCGAGAAGTAGCAGAAATGGTAGAGAAAAGACACGCTCATTTAGTTAGGGATATTG 97 Query 3260 AAGGTTATATCAAGGTTTTAGAGGACTCCTCAAAATTGAGTAGTCATAATTTCTTTGAAG 3319 | |||| || | ||||| | | |||| ||| | | || |||||||| || Sbjct 96 AGAATTATCAAAACGCTTTAGGTCAAAACCCAAATTTGGTTTCTGATGATTTCTTTATAG 37 Query 3320 AAAGCACCTAT 3330 |||||| |||| Sbjct 36 AAAGCAGCTAT 26 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137077223623928