Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq153189 120 3e-22 seq210337 107 2e-18 seq26661 107 2e-18 seq117562 102 9e-17 seq214945 96.9 4e-15 seq84055 95.1 1e-14 seq54724 93.3 5e-14 seq26664 84.2 2e-11 >seq153189 Length=17048 Score = 120 bits (132), Expect = 3e-22 Identities = 161/220 (73%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| |||||||| ||||| || |||||||||||| |||||||| || || || || | Sbjct 14952 ACGTAACACCAAGTGCAAAGTTGACTCCTTTTGAATGTTGTAATCCGCAAGTGTGCGACC 14893 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||| ||||||||||| ||||| ||||||||||| | ||| | | ||||| Sbjct 14892 ATCCTCGAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATCCCTTCCTT 14833 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 |||| ||| || |||| ||| | | | ||||| |||| || || || | | Sbjct 14832 GTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCAGAGCTC---TCGACTTCAAGGG 14777 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || ||||| || || ||||| || || || ||||| Sbjct 14776 TGATTGTCTTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 14737 Score = 116 bits (128), Expect = 4e-21 Identities = 160/220 (73%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| |||||||| ||||| || |||||||||||| |||||||| || || || || | Sbjct 14724 ACGTAACACCAAGTGCAAAGTTGACTCCTTTTGAATGTTGTAATCCGCAAGTGTGCGACC 14665 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||| ||||||||||| ||||| ||||||||||| | ||| | | ||||| Sbjct 14664 ATCCTCGAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATCCCTTCCTT 14605 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 |||| ||| || |||| ||| | | | ||||| |||| ||||| |||| | Sbjct 14604 GTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCTGAGCTC---TCCACCTCGAGGG 14549 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || || || || | || || || ||||| ||||| Sbjct 14548 TAATAGTCTTACCAGTCAAGGTTTTGACGAAGATCTGCAT 14509 Score = 86.0 bits (94), Expect = 7e-12 Identities = 151/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||| || | || |||||| ||||| ||||| || |||| || || | Sbjct 14496 ACGCAACACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGCCAAGGTGCGTCC 14437 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || | ||||| || ||||| || | || |||||| || | || | | ||||| Sbjct 14436 ATCTTCCAATTGCTTTCCGGCGAAGATCAATCTCTGCTGATCCGGAGGAATACCTTCCTT 14377 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169 |||| ||| || ||| | | | | |||||| ||| |||||| |||| || Sbjct 14376 GTCCTGGATCTTGGCTTTAACATTGTCGATCGTGTCCGAGCT---TTCCACCTCGAGGGT 14320 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || || || || || ||||| || ||||| ||||| Sbjct 14319 GATTGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 14281 >seq210337 Length=1863 Score = 107 bits (118), Expect = 2e-18 Identities = 156/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||| | ||| | ||| |||||| || || ||||| || ||||| || || | Sbjct 825 ACGAAGCACAAGATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGTCC 884 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || |||| ||||||||| || || || |||| ||||||||| | ||| | | ||| || Sbjct 885 ATCTTCTAACTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGTGGGATTCCCTCTTT 944 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169 |||| ||| || ||||| | | | ||||| |||| ||||| || | || Sbjct 945 GTCCTGGATCTTGGCTTTGACATTATCAATGGTGTCTGAGCTC---TCCACCTCCAAAGT 1001 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||||| || || || ||||| |||||||| ||||| Sbjct 1002 GATGGTTTTTCCGGTAAGGGTCTTGACAAAGATCTGCAT 1040 Score = 100 bits (110), Expect = 3e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| | | ||||||||| | || | || |||||| ||||| |||||||| ||| Sbjct 586 CCTCCACGAAGACGCAACACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAATCGGCC 645 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | |||||| | || || ||||||||||||||||| || |||| ||||| || | || Sbjct 646 AAAGTCCGACCATCCTCGAGCTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGAGGG 705 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | | ||||||||| ||| || || | | | | |||||| |||| ||| Sbjct 706 ATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATCGTGTCTGAGCTC---TCC 762 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | || |||||||| || || || ||||| || || || ||||| Sbjct 763 ACCTCAAGAGTAATGGTTTTACCGGTAAGGGTCTTCACGAAAATCTGCAT 812 Score = 98.7 bits (108), Expect = 1e-15 Identities = 154/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||||||| | || | ||| ||| || || |||||||||||||||||||||| | Sbjct 1281 ACGCAACACAAGGTGGAGAGTGGACTCTTTCTGGATATTGTAATCAGCCAGAGTCCTTCC 1340 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||||||||| ||||| || |||| ||||| || | || | | ||||| Sbjct 1341 ATCTTCAAGCTGCTTACCGGCGAAGATAAGTCTTTGCTGATCCGGAGGGATACCTTCCTT 1400 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169 |||| ||| || |||| | | | || || |||| || || || | || Sbjct 1401 GTCCTGGATCTTAGCCTTGACGTTATCAATAGTATCTGAGCTC---TCAACCTCAAGAGT 1457 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||| || || || || ||||| |||||||| ||||| Sbjct 1458 GATGGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 1496 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||||||| | || || || |||||||||||||| |||| |||||| | || || Sbjct 376 ACCAAATGAAGAGTCGATTCTTTCTGAATATTGTAATCCGCCAAAGTCCGACCATCCTCA 435 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 ||||| ||||||||||| ||||||| ||| ||||| | || | | || |||||| || Sbjct 436 AGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCTTTGTCC-TG 494 Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 42175 | |||| | || | | | | ||||| |||| || || || | || || || Sbjct 495 AATTTTAGCCTTCACATTATCAATAGTGTCCGAGCTC---TCAACCTCCAAGGTAATAGT 551 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 ||||| || | ||||| ||||||||||||||| Sbjct 552 CTTGCCTGTCAAAGTCTTCACAAAGATTTGCATT 585 Score = 93.3 bits (102), Expect = 5e-14 Identities = 160/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| | ||| | ||||| || | ||| ||| ||||| || |||||||| || Sbjct 1041 ACCACCTCTGAGACGAAGTACCAAGTGTAGAGTGGACTCTTTTTGGATGTTGTAATCCGC 1100 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || || || |||||||| || || || |||| |||||| || | || Sbjct 1101 AAGAGTACGTCCATCTTCAAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGAGG 1160 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCG---CTCGATTC 42157 | | || |||||| ||| || |||| | | | ||| ||| ||| || Sbjct 1161 GATACCTTCTTTGTCCTGGATCTTAGCCTTGACATTATCGATCGTATCGGAGCTC---TC 1217 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | || |||||||| || || || ||||| |||||||||||||| Sbjct 1218 AACCTCAAGAGTAATGGTTTTCCCAGTGAGAGTCTTGACAAAGATTTGCAT 1268 >seq26661 Length=2801 Score = 107 bits (118), Expect = 2e-18 Identities = 156/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||| || | || ||||||||| || ||||| || || ||||| || | Sbjct 1845 ACGCAACACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCGGCTAGAGTTCGACC 1786 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || || ||||| || ||||| || | || ||||||||| | || | | ||||| Sbjct 1785 GTCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGAGGGATACCTTCCTT 1726 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169 |||| ||||||| ||| | | | | ||||| |||| || || |||| || Sbjct 1725 GTCCTGGATTTTTGCTTTCACGTTATCAATGGTGTCTGAGCTC---TCGACCTCGAGGGT 1669 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || |||||||| | ||||| |||||||| ||||| Sbjct 1668 AATAGTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 1630 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||| ||||| |||| || ||||| ||||| || || || ||||| || || | Sbjct 2073 ACGCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTATAGTCGGCCAGTGTACGGCC 2014 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||||||||||||||| ||||| ||||||||||| | || | | || || Sbjct 2013 ATCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCTTT 1954 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 |||| ||| | || | || ||| | | | ||||| |||| ||||| || | | Sbjct 1953 GTCC-TGAATCTTAGCTTTCACGTTGTCGATGGTGTCTGAGCTC---TCCACCTCAAGGG 1898 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || || || || | ||||| || ||||||||||| Sbjct 1897 TAATAGTCTTACCAGTCAAGGTCTTCACGAAGATTTGCAT 1858 Score = 82.4 bits (90), Expect = 8e-11 Identities = 136/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || || |||||||| ||||| || || | || || ||||| |||||||| || Sbjct 2277 CTCTTTCTGTATGTTGTAATCCGCCAGTGTGCGACCATCCTCGAGCTGTTTACCAGCAAA 2218 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | ||| | | ||||||||| ||| || |||| | Sbjct 2217 GATGAGACGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 2158 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | ||||| ||| || || || | ||||| || ||||| ||||| || || Sbjct 2157 GTCAATTGTGTCAGAACTC---TCGACTTCCAGGGTGATAGTCTTGCCGGTTAGGGTTTT 2101 Query 42194 TACAAAGATTTGCAT 42208 || || || ||||| Sbjct 2100 CACGAATATCTGCAT 2086 >seq117562 Length=2070 Score = 102 bits (112), Expect = 9e-17 Identities = 162/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| | ||| | ||| | ||| | ||| |||||| || || |||||||| || Sbjct 1458 ACCACCTCTGAGACGAAGCACAAGATGGAGTGTAGACTCCTTCTGGATGTTGTAATCCGC 1399 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 |||||||| |||| || ||||||||||| ||||| || |||| ||||| || | || Sbjct 1398 CAGAGTCCTTCCGTCTTCAAGCTGCTTACCGGCGAAGATAAGTCTTTGCTGATCCGGAGG 1339 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | | ||||||||| ||| || ||||| | | | || || ||| ||| Sbjct 1338 AATACCTTCCTTGTCCTGGATCTTAGCTTTGACGTTATCAATAGTATCTGAGCT---TTC 1282 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||| || ||||| || || || | ||||| || ||||||||||| Sbjct 1281 GACTTCGAGGGTAATGGTCTTTCCGGTCAAAGTCTTGACGAAGATTTGCAT 1231 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 |||||||| | || | || |||||| ||||||||||| || || || || || | Sbjct 1673 CGCAACACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCCGCAAGCGTACGACCA 1614 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || ||||||||||||||||| ||||||| |||||| || | || | | |||||| Sbjct 1613 TCCTCGAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGATCCGGAGGAATCCCTTCCTTG 1554 Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTG 42170 || ||| || |||| | | | ||||| |||| || || || | || Sbjct 1553 TCTTGGATCTTAGCCTTGACATTGTCTATTGTGTCTGAGCTC---TCAACTTCTAGAGTA 1497 Query 42171 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||||| || || || ||||| || || || ||||| Sbjct 1496 ATGGTTTTCCCGGTGAGGGTCTTCACGAATATCTGCAT 1459 >seq214945 Length=15579 Score = 96.9 bits (106), Expect = 4e-15 Identities = 163/233 (70%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCT--CTCCTTTTGAATATTGTAATCA 42038 |||||||||||| | | ||||| || | | ||| ||||||||| || ||||||||| Sbjct 5487 ACCTCCTCTTAACCTGAGAACCAAGTGGA--GAGCTGACTCCTTTTGGATGTTGTAATCA 5544 Query 42039 GCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCT 42098 |||| ||| || | || || ||||| ||||| || || || |||| ||| ||||| | Sbjct 5545 GCCAAAGTACGACCATCTTCCAGCTGTTTACCGGCAAAGATCAGTCTCTGTTGGTCTGAA 5604 Query 42099 GGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGAT 42155 || || | || || || ||| || |||| | | || ||||| ||| | Sbjct 5605 GGGACTCCTTCTTTCTCTTGGATCTTGGCCTTGACGTTTTCTACTGTGTCCGAGCT---T 5661 Query 42156 TCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || |||| | ||||| ||||| | || |||||||| ||||||||||| Sbjct 5662 TCGACCTCGAGGGATATGGTCTTGCCTTTAAGAGTCTTTACGAAGATTTGCAT 5714 Score = 86.0 bits (94), Expect = 7e-12 Identities = 151/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||||||| | || | ||| |||||||| ||||||||||| |||| ||| || | Sbjct 7774 ACGCAACACAAGGTGAAGTGTTGATTCCTTTTGGATATTGTAATCGGCCAAAGTACGGCC 7833 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || ||||| ||||| || || || || | || | ||| | || || | || || Sbjct 7834 GTCCTCGAGCTGTTTACCGGCAAAGATCAGGCTTTGTTTGTCAGAAGGGACTCCTTCTTT 7893 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169 || ||| || |||| | | || ||||| ||| ||| || |||| | Sbjct 7894 CTCTTGGATCTTGGCCTTGACGTTTTCTACGGTGTCCGAGCT---TTCGACCTCGAGGGA 7950 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| ||||| || || |||||||| ||||||||||| Sbjct 7951 TATGGTCTTGCCTGTAAGAGTCTTTACGAAGATTTGCAT 7989 >seq84055 Length=806 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 97 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 156 Query 57067 TACTACCGAGGATTG 57081 |||||||||||| || Sbjct 157 TACTACCGAGGACTG 171 >seq54724 Length=7877 Score = 93.3 bits (102), Expect = 5e-14 Identities = 155/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||| || | || ||| || ||||||||||| || |||||||| | | Sbjct 2090 ACGCAACACCAAGTGAAGAGTAGACTCTTTCTGAATATTGTAGTCGGCCAGAGTTCTGCC 2031 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || || ||||| || || || || | || ||||||||| | || | | || || Sbjct 2030 GTCCTCGAGTTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCCGGAGGGATACCTTCTTT 1971 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 |||| ||| || ||| | ||| | | | ||||| |||| || || |||| | Sbjct 1970 GTCCTGGATCTTGGCTTTCA-CGTTGTCGATGGTGTCTGAGCTC---TCAACCTCGAGGG 1915 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | |||||||| || || | ||||| |||||||| ||||| Sbjct 1914 TAATGGTTTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 1875 >seq26664 Length=6282 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || || ||||| || |||| || || || || || ||||| Sbjct 5682 TCCTTCTGGATGTTGTAGTCGGCGAGAGTACGTCCGTCTTCGAGTTGTTTTCCCGCGAAG 5741 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | |||||||||||| | ||| | | |||||||| ||| || ||||| | Sbjct 5742 ATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTCGCTTTGACATTG 5801 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | || ||| ||||| || |||| || || || || || ||||| || || || Sbjct 5802 TCGATGGTATCGGATGATTCGACCTCGAGAGTTATCGTCTTCCCGGTTAGGGTTTTCACG 5861 Query 42198 AAGATTTGCAT 42208 ||||| ||||| Sbjct 5862 AAGATCTGCAT 5872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541398279123520