Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_011645.1
Length=37456
Score E
Sequences producing significant alignments: (Bits) Value
seq158858 104 6e-18
>seq158858
Length=235449
Score = 104 bits (114), Expect = 6e-18
Identities = 188/271 (69%), Gaps = 7/271 (3%)
Strand=Plus/Plus
Query 19547 GTGTCCTAATCCTATGACACCAACTGAAATTACTCTCCATAATACTTATAATGATGCACC 19606
||||||| || |||||| | || | ||||| | ||||| |||||||||||||| ||
Sbjct 160032 GTGTCCTTATTCTATGAAAGCAGAGTACATTACAGTGCATAACACTTATAATGATGCGCC 160091
Query 19607 AGCCATAAACGAACGTAATAACGT-AGCTAATA-ACTCACAAGGAACAAGTTTTCACGTC 19664
|| | ||||| ||| || | | | | | ||| || ||| | || ||| ||
Sbjct 160092 TGCTAAGAACGAGGTAAATTACATGATCGGAAATACTAACGAGGTTTCA--TTCCACTTC 160149
Query 19665 GTTGTAGATGATAAAGAAGCGATCCAATTAATTCCATTCAATCGCAATGCCTGGCACGCT 19724
| |||||||||| |||| || ||| ||||| | |||| ||||| ||||| |
Sbjct 160150 GCAGTAGATGATATCGAAGTTATTCAAGGTATTCCGGTTGATCGTAATGCTTGGCATTGT 160209
Query 19725 GGAGACGGAGGAAGCGGACGCGGTAACCGTCATTCTATCGGAGTTGAAATCTGTTATTCT 19784
|| || || || || ||| ||||| | |||||||| |||||||||||||| ||
Sbjct 160210 GGTGATGGTGGT---GGTAACGGAAACCGAAAATCTATCGGTGTTGAAATCTGTTACTCA 160266
Query 19785 AAATCTGGTGGCCCGCGTTATGAACAAGCTG 19815
||||||||| || | |||||| ||||||
Sbjct 160267 TTATCTGGTGGTCCAAGATATGAAAAAGCTG 160297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119357632782448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |