Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_011645.1 Length=37456 Score E Sequences producing significant alignments: (Bits) Value seq158858 104 6e-18 >seq158858 Length=235449 Score = 104 bits (114), Expect = 6e-18 Identities = 188/271 (69%), Gaps = 7/271 (3%) Strand=Plus/Plus Query 19547 GTGTCCTAATCCTATGACACCAACTGAAATTACTCTCCATAATACTTATAATGATGCACC 19606 ||||||| || |||||| | || | ||||| | ||||| |||||||||||||| || Sbjct 160032 GTGTCCTTATTCTATGAAAGCAGAGTACATTACAGTGCATAACACTTATAATGATGCGCC 160091 Query 19607 AGCCATAAACGAACGTAATAACGT-AGCTAATA-ACTCACAAGGAACAAGTTTTCACGTC 19664 || | ||||| ||| || | | | | | ||| || ||| | || ||| || Sbjct 160092 TGCTAAGAACGAGGTAAATTACATGATCGGAAATACTAACGAGGTTTCA--TTCCACTTC 160149 Query 19665 GTTGTAGATGATAAAGAAGCGATCCAATTAATTCCATTCAATCGCAATGCCTGGCACGCT 19724 | |||||||||| |||| || ||| ||||| | |||| ||||| ||||| | Sbjct 160150 GCAGTAGATGATATCGAAGTTATTCAAGGTATTCCGGTTGATCGTAATGCTTGGCATTGT 160209 Query 19725 GGAGACGGAGGAAGCGGACGCGGTAACCGTCATTCTATCGGAGTTGAAATCTGTTATTCT 19784 || || || || || ||| ||||| | |||||||| |||||||||||||| || Sbjct 160210 GGTGATGGTGGT---GGTAACGGAAACCGAAAATCTATCGGTGTTGAAATCTGTTACTCA 160266 Query 19785 AAATCTGGTGGCCCGCGTTATGAACAAGCTG 19815 ||||||||| || | |||||| |||||| Sbjct 160267 TTATCTGGTGGTCCAAGATATGAAAAAGCTG 160297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119357632782448