Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_011976.1 Length=43016 Score E Sequences producing significant alignments: (Bits) Value seq104206 84.2 6e-12 >seq104206 Length=286 Score = 84.2 bits (92), Expect = 6e-12 Identities = 184/275 (67%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 27583 CCATTAATTCCAACATTAATCTCAGTGGTGTAGCGGTCTTGCCCTGTCTGGTCTTGCCAC 27642 ||| || || ||||| || || || |||||||| ||| || | || || ||||| Sbjct 15 CCAATATTTACAACA---ATTTCTGTAGTGTAGCGTTCTAAACCATTTTGATCCTGCCAT 71 Query 27643 TTTCTGGTTCTCAGCATTCCCTCGAAATAAACCTGATCACCTTTTTTCACATACTGCCCT 27702 ||||| ||| || ||| || | ||| || ||| ||||||| | ||| | ||| Sbjct 72 TTTCTAGTTTGCAATGATCCTTCAATATATACTTGAGAACCTTTTCGAAGATATTCGCCT 131 Query 27703 ACGACTTCAGCAAGTTTCCCAACTACGGCAACACGATGCCATTCAGTCTGCTCCTTTTGT 27762 | | |||||| | ||| |||| || | | | |||||||||||| | || || | | Sbjct 132 GCAATTTCAGCTAATTTACCAAATAAAACTATTCTATGCCATTCAGTTTTTTCTTTATTT 191 Query 27763 TCGCCAGTCTGTTTATCTCGCCACTGCTCTGATGTAGCGACTGTCAGGTTAGCGAACGCC 27822 || ||||| | ||||||| ||| | ||||| || || | ||||| || | | ||| Sbjct 192 TCTCCAGTATTTTTATCTTTCCAATTTTCTGAAGTTGCTAATGTCATATTCACTACCGCA 251 Query 27823 GTCCCTGATGGTGAATAACGAACCTCCGGGTCTTG 27857 | || || ||||||||| || || ||||| Sbjct 252 TTACCATTAGGCATATAACGAACTTCAGGATCTTG 286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137093172850608