Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_012784.1
Length=44492
Score E
Sequences producing significant alignments: (Bits) Value
seq81513 168 2e-37
>seq81513
Length=399
Score = 168 bits (186), Expect = 2e-37
Identities = 195/260 (75%), Gaps = 2/260 (1%)
Strand=Plus/Plus
Query 10273 TGGTTTAAATGCAATACATTACAAGATACCAGAAAGACAATGACGGTACTTATTCCGTCG 10332
|| |||||||||| | || || |||||||| || | ||||||| |||||||||||
Sbjct 141 TGATTTAAATGCAGCAAATCACTAGATACCAATTGGATAGCGACGGTATTTATTCCGTCG 200
Query 10333 TTGCTACTGGTGTTGAACTTGAACAAAGTCACATTG-ACTTACTAGAAAACGGATATCCA 10391
|||| |||||||||||| | ||| | ||||||| | ||||| |||| ||||| |||
Sbjct 201 TTGCCACTGGTGTTGAATTAGAAAATAGTCACACAGAACTTA-TAGATAACGGTTATAGC 259
Query 10392 CTAAAAGCAGAAGTAGAGGTTCCGGACAATAAAAAACTATCTATAGAACAACGCaaaaaa 10451
|||| || | ||| ||||| || |||||| | ||||| || ||||| |||||
Sbjct 260 TTAAACGCTAATGTAACTGTTCCAGATAATAAATTGATTTCTATTGACCAACGTAAAAAG 319
Query 10452 aTATTCGCAATGTGTAGAGATATAGAACTTCACTGGGGCGAACCAGTAGAATCAACTAGA 10511
||||| || ||||||| |||||| ||| | ||||||| |||||||||||| || |||
Sbjct 320 ATATTTGCCATGTGTAAAGATATTGAATTGTACTGGGGAGAACCAGTAGAAGCATTAAGA 379
Query 10512 AAATTATTACAAACAGAATT 10531
|| ||| |||| |||||
Sbjct 380 CAAAGATTTCAAAGTGAATT 399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141801384566544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |