Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_013693.1
Length=158006
Score E
Sequences producing significant alignments: (Bits) Value
seq249645 134 1e-26
>seq249645
Length=476466
Score = 134 bits (148), Expect = 1e-26
Identities = 278/408 (68%), Gaps = 12/408 (3%)
Strand=Plus/Minus
Query 53664 GTTGATCTGAATACCGTAGTCGATACGGCGTTCGCGGTTTTCTTCAGTGCCACGGTTATT 53723
||| | ||| | |||||||| ||| | || | ||||| |||||| || ||||||||
Sbjct 264957 GTTTAACTGTACGCCGTAGTCCATATGACGGACACGGTTGTCTTCAACACCGCGGTTATT 264898
Query 53724 CTTCAGTAC----AACGACGTCATCGAACTGGTAA-TGCCACAGAGGGATGTACGCTGTC 53778
|| ||||| || ||| || |||| ||| ||||| || ||| | || |||
Sbjct 264897 TTTGAGTACCAGTAATGAC----TC-AACTTCTAAATGCCATAGTGGGTAGAACAACGTC 264843
Query 53779 GCCGCACCACCACGAATGCCGCCCTGGGAGCAAGACTTGAGCGCCCCAGTGAGATACTTG 53838
|| ||||| ||||| | ||| || || ||||| | || | || || || | | ||
Sbjct 264842 GCAGCACCGCCACGTACGCCACCTTGTGAGCAGCATTTAA-CGGCCGTTTGGAACAATTT 264784
Query 53839 ATGAATGGGATCAG-GCCTGTGTGAACCATCTCTCCGCCGCGAATAGGACTGCCAATCCC 53897
|| || ||| | ||| || || || ||||| || ||||| || |||| |
Sbjct 264783 ATAAAAAGGAATACAGCCAGTATGCTGTGCTTCACCGCCACGGATAGGGCTACCAAGGGC 264724
Query 53898 ACGGATAGCCCCGACGTCAAAGCCGATACCCGCACGTTTGGACACATAGTCAACGATGGT 53957
||||||| || ||| | ||||||||| ||||| | ||||||||| |||||||
Sbjct 264723 ACGGATACGACCTGCGTTGATGCCGATACCAGCACGCTGTGACACATAGCGTACGATGGC 264664
Query 53958 CTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCAGTTTTGATCAGGACACAGGAACT 54017
| | || |||||||||||||| | | | |||||| || ||| | ||| || || ||
Sbjct 264663 GCTAGTGGTGGCGTTGATAGAGTCTAAGCTATCACCACATTCGATTAAGACGCACGAGCT 264604
Query 54018 GAACTGACGGGTAGGAGTACGAACACCTGCCATAATCGGGGTGGGAAG 54065
|||||||| | || ||||| ||||||| ||| || || || || ||
Sbjct 264603 AAACTGACGCGATGGCGTACGCACACCTGACATGATTGGCGTTGGTAG 264556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 503802682470080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |