Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_014260.1 Length=172253 Score E Sequences producing significant alignments: (Bits) Value seq249645 118 1e-21 >seq249645 Length=476466 Score = 118 bits (130), Expect = 1e-21 Identities = 190/272 (70%), Gaps = 6/272 (2%) Strand=Plus/Minus Query 144918 TTCAACTGGATTCCGTAGTCCATATGTCGAATACGGTTTTCATCAACGCCCTTGTTATTT 144977 || ||||| | |||||||||||||| || | |||||| || ||||| || ||||||| Sbjct 264956 TTTAACTGTACGCCGTAGTCCATATGACGGACACGGTTGTCTTCAACACCGCGGTTATTT 264897 Query 144978 TTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 145037 || || || || | |||||||| |||||||| | || || | || ||||| Sbjct 264896 TTGAGTACCAGTAATGACTCAACTTCTAAATGCCATAGTGGGTAGAACAACGTCGCAGCA 264837 Query 145038 CCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAAT 145097 |||||||| | ||||||||||| || ||||||| || || ||||| ||| | || Sbjct 264836 CCGCCACGTACGCCACCTTGTGAGCAGCATTTAACGGCCGTTTGGAACAATTTATAAAAA 264777 Query 145098 GGAATAACACCGGTATGTTTGACTTCACCCATGCCA---ATACGAGAACCTTCAGCACGA 145154 |||||| || ||||| | ||||||| |||| ||| | ||| ||||| Sbjct 264776 GGAATACAGCCAGTATGCTGTGCTTCACC---GCCACGGATAGGGCTACCAAGGGCACGG 264720 Query 145155 ATCATACCAACGTTGATACCAATACCTGCACG 145186 || ||| ||||||| || ||||| ||||| Sbjct 264719 ATACGACCTGCGTTGATGCCGATACCAGCACG 264688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549240794577440