Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_014260.1
Length=172253
Score E
Sequences producing significant alignments: (Bits) Value
seq249645 118 1e-21
>seq249645
Length=476466
Score = 118 bits (130), Expect = 1e-21
Identities = 190/272 (70%), Gaps = 6/272 (2%)
Strand=Plus/Minus
Query 144918 TTCAACTGGATTCCGTAGTCCATATGTCGAATACGGTTTTCATCAACGCCCTTGTTATTT 144977
|| ||||| | |||||||||||||| || | |||||| || ||||| || |||||||
Sbjct 264956 TTTAACTGTACGCCGTAGTCCATATGACGGACACGGTTGTCTTCAACACCGCGGTTATTT 264897
Query 144978 TTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 145037
|| || || || | |||||||| |||||||| | || || | || |||||
Sbjct 264896 TTGAGTACCAGTAATGACTCAACTTCTAAATGCCATAGTGGGTAGAACAACGTCGCAGCA 264837
Query 145038 CCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAAT 145097
|||||||| | ||||||||||| || ||||||| || || ||||| ||| | ||
Sbjct 264836 CCGCCACGTACGCCACCTTGTGAGCAGCATTTAACGGCCGTTTGGAACAATTTATAAAAA 264777
Query 145098 GGAATAACACCGGTATGTTTGACTTCACCCATGCCA---ATACGAGAACCTTCAGCACGA 145154
|||||| || ||||| | ||||||| |||| ||| | ||| |||||
Sbjct 264776 GGAATACAGCCAGTATGCTGTGCTTCACC---GCCACGGATAGGGCTACCAAGGGCACGG 264720
Query 145155 ATCATACCAACGTTGATACCAATACCTGCACG 145186
|| ||| ||||||| || ||||| |||||
Sbjct 264719 ATACGACCTGCGTTGATGCCGATACCAGCACG 264688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 549240794577440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |