Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_014460.1 Length=41207 Score E Sequences producing significant alignments: (Bits) Value seq81513 159 9e-35 >seq81513 Length=399 Score = 159 bits (176), Expect = 9e-35 Identities = 193/260 (74%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 32535 TGGTTTAAATGCAATACATTACAAGATACCAGAAAGACAATGACGGCACTTATTCCGTCG 32594 || |||||||||| | || || |||||||| || | ||||| | ||||||||||| Sbjct 141 TGATTTAAATGCAGCAAATCACTAGATACCAATTGGATAGCGACGGTATTTATTCCGTCG 200 Query 32595 TTGCTACTGGTGTTGAACTTGAACAAAGTCACATTGATTTACTAGAAAACGGATACTCGC 32654 |||| |||||||||||| | ||| | ||||||| || | |||| ||||| || | || Sbjct 201 TTGCCACTGGTGTTGAATTAGAAAATAGTCACACAGAACTTATAGATAACGGTTA-TAGC 259 Query 32655 -TAAAAGCAGAAGTAGAGGTTCCGGACAATAAAAAGTTGTCTATCGAACAACGCaaaaaa 32713 |||| || | ||| ||||| || |||||| | | ||||| || ||||| ||||| Sbjct 260 TTAAACGCTAATGTAACTGTTCCAGATAATAAATTGATTTCTATTGACCAACGTAAAAAG 319 Query 32714 aTATTCGCAATGTGTAGAGATATAGAACTTCACTGGGGAGAACCGGTGGAATCAACTAGA 32773 ||||| || ||||||| |||||| ||| | ||||||||||||| || ||| || ||| Sbjct 320 ATATTTGCCATGTGTAAAGATATTGAATTGTACTGGGGAGAACCAGTAGAAGCATTAAGA 379 Query 32774 AAATTATTACAAACAGAATT 32793 || ||| |||| ||||| Sbjct 380 CAAAGATTTCAAAGTGAATT 399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131322742637784