Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_014460.1
Length=41207
Score E
Sequences producing significant alignments: (Bits) Value
seq81513 159 9e-35
>seq81513
Length=399
Score = 159 bits (176), Expect = 9e-35
Identities = 193/260 (74%), Gaps = 2/260 (1%)
Strand=Plus/Plus
Query 32535 TGGTTTAAATGCAATACATTACAAGATACCAGAAAGACAATGACGGCACTTATTCCGTCG 32594
|| |||||||||| | || || |||||||| || | ||||| | |||||||||||
Sbjct 141 TGATTTAAATGCAGCAAATCACTAGATACCAATTGGATAGCGACGGTATTTATTCCGTCG 200
Query 32595 TTGCTACTGGTGTTGAACTTGAACAAAGTCACATTGATTTACTAGAAAACGGATACTCGC 32654
|||| |||||||||||| | ||| | ||||||| || | |||| ||||| || | ||
Sbjct 201 TTGCCACTGGTGTTGAATTAGAAAATAGTCACACAGAACTTATAGATAACGGTTA-TAGC 259
Query 32655 -TAAAAGCAGAAGTAGAGGTTCCGGACAATAAAAAGTTGTCTATCGAACAACGCaaaaaa 32713
|||| || | ||| ||||| || |||||| | | ||||| || ||||| |||||
Sbjct 260 TTAAACGCTAATGTAACTGTTCCAGATAATAAATTGATTTCTATTGACCAACGTAAAAAG 319
Query 32714 aTATTCGCAATGTGTAGAGATATAGAACTTCACTGGGGAGAACCGGTGGAATCAACTAGA 32773
||||| || ||||||| |||||| ||| | ||||||||||||| || ||| || |||
Sbjct 320 ATATTTGCCATGTGTAAAGATATTGAATTGTACTGGGGAGAACCAGTAGAAGCATTAAGA 379
Query 32774 AAATTATTACAAACAGAATT 32793
|| ||| |||| |||||
Sbjct 380 CAAAGATTTCAAAGTGAATT 399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 131322742637784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |