Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_014467.1 Length=176788 Score E Sequences producing significant alignments: (Bits) Value seq249645 206 3e-48 >seq249645 Length=476466 Score = 206 bits (228), Expect = 3e-48 Identities = 308/437 (70%), Gaps = 0/437 (0%) Strand=Plus/Plus Query 41134 AAACTGTCATTACCTACGCCTATTATGGCGGGTGTGCGTACTCCTACGCGTCAGTTCTCC 41193 ||| | ||| |||| ||||| || ||| | ||||||||||| || |||||||||| | Sbjct 264547 AAAATCTCACTACCAACGCCAATCATGTCAGGTGTGCGTACGCCATCGCGTCAGTTTAGC 264606 Query 41194 AGTTGTGTTGTAATCGAATCTGGTGATTCTCTGGGTTCTCTGAACGCTGTTACGTCCGCG 41253 || || ||||||||| ||||||| | | ||| | ||||| || ||| Sbjct 264607 TCGTGCGTCTTAATCGAATGTGGTGATAGCTTAGACTCTATCAACGCCACCACTAGCGCC 264666 Query 41254 ATCGTGAAATATATCTCTCAACGTGCGGGTATCGGTGTCAACGCCGGACACATTCGCGCT 41313 ||||| ||| | || || ||||| |||||||| ||||||| || | || || || Sbjct 264667 ATCGTACGCTATGTGTCACAGCGTGCTGGTATCGGCATCAACGCAGGTCGTATCCGTGCC 264726 Query 41314 ATGGGTTCAAAAATCCGTGGTGGTGAAGCAGTCCATACAGGCGTTATCCCGTTCTGGAAA 41373 | ||| |||||||| ||||||||| ||||| ||| ||| || || | ||| Sbjct 264727 CTTGGTAGCCCTATCCGTGGCGGTGAAGCACAGCATACTGGCTGTATTCCTTTTTATAAA 264786 Query 41374 CACATTCAGACGGCGGTTAAATCTTGTTCCCAGGGTGGCGTTCGTGGTGGTGCAGCAACC 41433 | || ||||| ||||||| || || || |||||||| ||||| ||||| || || Sbjct 264787 TTGTTCCAAACGGCCGTTAAATGCTGCTCACAAGGTGGCGTACGTGGCGGTGCTGCGACG 264846 Query 41434 CTGTATTATCCGATCTGGCATCTTGAAGTTGAAAACCTGCTGGTTCTGAAAAATAACCGT 41493 ||| || || | |||||| | |||||||| | ||||| || ||||||||||| Sbjct 264847 TTGTTCTACCCACTATGGCATTTAGAAGTTGAGTCATTACTGGTACTCAAAAATAACCGC 264906 Query 41494 GGCGTTGAAGAAAACCGTATTCGTCACCTGGACTATGGCGTACAGCTTAACGATTTGATG 41553 || |||||||| |||||| | ||||| ||||||| ||||||||| | ||| | |||| Sbjct 264907 GGTGTTGAAGACAACCGTGTCCGTCATATGGACTACGGCGTACAGTTAAACAAAACGATG 264966 Query 41554 TATAAGCGTTTAATCAA 41570 || | ||| | ||||| Sbjct 264967 TACACGCGCCTCATCAA 264983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563704319418240