Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_014792.1
Length=169285
Score E
Sequences producing significant alignments: (Bits) Value
seq249645 143 3e-29
seq26767 136 4e-27
>seq249645
Length=476466
Score = 143 bits (158), Expect = 3e-29
Identities = 196/274 (72%), Gaps = 0/274 (0%)
Strand=Plus/Minus
Query 141354 TTATTCAACTGAACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTG 141413
|| || ||||| || || ||||||||||| | || ||||| |||||||| || |||
Sbjct 264959 TTGTTTAACTGTACGCCGTAGTCCATATGACGGACACGGTTGTCTTCAACACCGCGGTTA 264900
Query 141414 TTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGCAGTAGCA 141473
|| || || || ||||| |||||||| |||||||||| || || | || |||
Sbjct 264899 TTTTTGAGTACCAGTAATGACTCAACTTCTAAATGCCATAGTGGGTAGAACAACGTCGCA 264840
Query 141474 GCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAG 141533
|| |||||||| | ||||||||||| ||| ||||||| ||||||||||| ||| |
Sbjct 264839 GCACCGCCACGTACGCCACCTTGTGAGCAGCATTTAACGGCCGTTTGGAACAATTTATAA 264780
Query 141534 AACGGAATAACACCAGTATGCTTGACTTCACCCATACCGATTTTCGAACCTTCAGCACGA 141593
|| |||||| |||||||||| ||||||| || ||| ||| |||||
Sbjct 264779 AAAGGAATACAGCCAGTATGCTGTGCTTCACCGCCACGGATAGGGCTACCAAGGGCACGG 264720
Query 141594 ATCATGCCAACGTTGATACCGATACCCGCCCGCT 141627
|| || ||||||| |||||||| || ||||
Sbjct 264719 ATACGACCTGCGTTGATGCCGATACCAGCACGCT 264686
>seq26767
Length=1149
Score = 136 bits (150), Expect = 4e-27
Identities = 279/415 (67%), Gaps = 0/415 (0%)
Strand=Plus/Plus
Query 141393 TTTTCTTCAACGCCCTTGTTGTTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCAT 141452
|||||||||| |||| | || || || | ||| | |||| |||||| ||| |||||||||
Sbjct 79 TTTTCTTCAATGCCCCTATTATTTTTTAAAACTAATAAACTTTCAATTTCAAAATGCCAT 138
Query 141453 AAAGGATAATAAGCAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACA 141512
| |||||| | ||| || || || || | | ||| ||||| ||||||||||| |||
Sbjct 139 ATTGGATAAAATATAGTTGCCGCTCCACCTCTAACTCCTCCTTGAGAACAGGATTTTACA 198
Query 141513 GCCGTTTGGAAATGTTTCCAGAACGGAATAACACCAGTATGCTTGACTTCACCCATACCG 141572
|| |||| |||||||| | || |||||| ||||||||| |||| || | |
Sbjct 199 GCACTTTGAAAATGTTTATAAAAAGGAATACAACCAGTATGAAATGCTTCGCCATTTCTA 258
Query 141573 ATTTTCGAACCTTCAGCACGAATCATGCCAACGTTGATACCGATACCCGCCCGCTTACTG 141632
|| |||| | |||||||| | ||| | || ||||| || || || || | |
Sbjct 259 ATAGGACTACCTACTGCACGAATTTTTCCAGCATTAATACCAATTCCTGCTCGTTGAGAA 318
Query 141633 ATATATTCGATGATTGAATTGGCGGTCTTATTGATTGACTTCAGGGAGTCAGCAGCTTCG 141692
| ||||| | || ||| | | || || || || | || ||| || |||
Sbjct 319 ACATATTTTACAATAGAACTAGTAGTAGCGTTAATAGAATCTAGATTATCATCACATTCA 378
Query 141693 ATAACCACACAGGAACTGAACTGCCGGGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTG 141752
|| | ||||| || || || || || ||||| ||||| | || | ||| || |||||
Sbjct 379 ATTAAAACACATGAGCTAAATTGTCGAGTAGGAGTTCTAACTCCAGACATAATTGGTGTC 438
Query 141753 GGCAACGAAACCTGTCTTGTGGATACTGCATCATAAAAACGGCAAACGTGCTTCA 141807
|| || |||| | || || | |||| ||||||||| ||||| ||||
Sbjct 439 GGTAAAGAAATTTTGAAAGTTGAAATGGCATTATAAAAACGCTGAACGTAATTCA 493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 539774919885600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |