Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_014792.1 Length=169285 Score E Sequences producing significant alignments: (Bits) Value seq249645 143 3e-29 seq26767 136 4e-27 >seq249645 Length=476466 Score = 143 bits (158), Expect = 3e-29 Identities = 196/274 (72%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 141354 TTATTCAACTGAACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTG 141413 || || ||||| || || ||||||||||| | || ||||| |||||||| || ||| Sbjct 264959 TTGTTTAACTGTACGCCGTAGTCCATATGACGGACACGGTTGTCTTCAACACCGCGGTTA 264900 Query 141414 TTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGCAGTAGCA 141473 || || || || ||||| |||||||| |||||||||| || || | || ||| Sbjct 264899 TTTTTGAGTACCAGTAATGACTCAACTTCTAAATGCCATAGTGGGTAGAACAACGTCGCA 264840 Query 141474 GCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAG 141533 || |||||||| | ||||||||||| ||| ||||||| ||||||||||| ||| | Sbjct 264839 GCACCGCCACGTACGCCACCTTGTGAGCAGCATTTAACGGCCGTTTGGAACAATTTATAA 264780 Query 141534 AACGGAATAACACCAGTATGCTTGACTTCACCCATACCGATTTTCGAACCTTCAGCACGA 141593 || |||||| |||||||||| ||||||| || ||| ||| ||||| Sbjct 264779 AAAGGAATACAGCCAGTATGCTGTGCTTCACCGCCACGGATAGGGCTACCAAGGGCACGG 264720 Query 141594 ATCATGCCAACGTTGATACCGATACCCGCCCGCT 141627 || || ||||||| |||||||| || |||| Sbjct 264719 ATACGACCTGCGTTGATGCCGATACCAGCACGCT 264686 >seq26767 Length=1149 Score = 136 bits (150), Expect = 4e-27 Identities = 279/415 (67%), Gaps = 0/415 (0%) Strand=Plus/Plus Query 141393 TTTTCTTCAACGCCCTTGTTGTTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCAT 141452 |||||||||| |||| | || || || | ||| | |||| |||||| ||| ||||||||| Sbjct 79 TTTTCTTCAATGCCCCTATTATTTTTTAAAACTAATAAACTTTCAATTTCAAAATGCCAT 138 Query 141453 AAAGGATAATAAGCAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACA 141512 | |||||| | ||| || || || || | | ||| ||||| ||||||||||| ||| Sbjct 139 ATTGGATAAAATATAGTTGCCGCTCCACCTCTAACTCCTCCTTGAGAACAGGATTTTACA 198 Query 141513 GCCGTTTGGAAATGTTTCCAGAACGGAATAACACCAGTATGCTTGACTTCACCCATACCG 141572 || |||| |||||||| | || |||||| ||||||||| |||| || | | Sbjct 199 GCACTTTGAAAATGTTTATAAAAAGGAATACAACCAGTATGAAATGCTTCGCCATTTCTA 258 Query 141573 ATTTTCGAACCTTCAGCACGAATCATGCCAACGTTGATACCGATACCCGCCCGCTTACTG 141632 || |||| | |||||||| | ||| | || ||||| || || || || | | Sbjct 259 ATAGGACTACCTACTGCACGAATTTTTCCAGCATTAATACCAATTCCTGCTCGTTGAGAA 318 Query 141633 ATATATTCGATGATTGAATTGGCGGTCTTATTGATTGACTTCAGGGAGTCAGCAGCTTCG 141692 | ||||| | || ||| | | || || || || | || ||| || ||| Sbjct 319 ACATATTTTACAATAGAACTAGTAGTAGCGTTAATAGAATCTAGATTATCATCACATTCA 378 Query 141693 ATAACCACACAGGAACTGAACTGCCGGGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTG 141752 || | ||||| || || || || || ||||| ||||| | || | ||| || ||||| Sbjct 379 ATTAAAACACATGAGCTAAATTGTCGAGTAGGAGTTCTAACTCCAGACATAATTGGTGTC 438 Query 141753 GGCAACGAAACCTGTCTTGTGGATACTGCATCATAAAAACGGCAAACGTGCTTCA 141807 || || |||| | || || | |||| ||||||||| ||||| |||| Sbjct 439 GGTAAAGAAATTTTGAAAGTTGAAATGGCATTATAAAAACGCTGAACGTAATTCA 493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539774919885600