Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_015157.1 Length=125956 Score E Sequences producing significant alignments: (Bits) Value seq158858 105 5e-18 >seq158858 Length=235449 Score = 105 bits (116), Expect = 5e-18 Identities = 198/289 (69%), Gaps = 8/289 (3%) Strand=Plus/Plus Query 125229 TGTAGTATCTGATACGTGGGATTTCTGGAAGCTTGTAACAGAATATCTACCAAACCTAAA 125288 |||||| || || |||| ||||||||| | ||| |||| ||| || || || Sbjct 214434 TGTAGTTTCAGACACGTATGATTTCTGGGCAGTAGTAGGAGAAATTCTTCCTCGTCTTAA 214493 Query 125289 AGACAAGATTATGTCTCGTGAAGGAACTTTGGTTATTCGTCCAGATAGTGGTGACCCAGT 125348 | | || ||| ||||| || | ||||||||||||| |||||||| ||||| || Sbjct 214494 GAAGGAAATCATGGAACGTGATGGTCGTATGGTTATTCGTCCTGATAGTGGAGACCCTGT 214553 Query 125349 TAAAATCCTTTGTGGTGATGAAGACTCTAAACTAGGTTCTGCAGAAAATAAAGGACTCAT 125408 | || ||| |||| | ||| | ||| || || || ||||||||| || Sbjct 214554 TCTTATTCTTACTGGTAACCCAGAAGCAAAAACAGAACTTG---AACGTAAAGGACTAAT 214610 Query 125409 TGAATGTCTGTGGGATACCTTTGGTGGAACTATCCAAGAGTCGACAGGGTTG-AAACTTC 125467 ||| | | ||||||| |||||||||||| || ||| |||||| ||||| Sbjct 214611 TGAGGCTTTATGGGATATCTTTGGTGGAACAATTACTGAGA----AGGGTTATAAACTAT 214666 Query 125468 TAGATTCACATATTGGTGCAATCTACGGGGATTCTATCACACTAGAACG 125516 ||||| | ||||||||||||||||| || || ||||| || || || || Sbjct 214667 TAGATACTCATATTGGTGCAATCTATGGTGACTCTATTACTCTTGAGCG 214715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401622106625036