Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_015251.1 Length=235229 Score E Sequences producing significant alignments: (Bits) Value seq26767 172 8e-38 >seq26767 Length=1149 Score = 172 bits (190), Expect = 8e-38 Identities = 304/442 (69%), Gaps = 2/442 (0%) Strand=Plus/Plus Query 33121 AACTTGTTAATATGTACTGTATAATCAATATTACGAATACGGGTTTCTTCAGTACCTTTA 33180 || || ||||| ||||||| |||||||| | ||| | | |||||||| | || || Sbjct 37 AATTTATTAATTTGTACTGCATAATCAACGTGACGTACTCTATTTTCTTCAATGCCCCTA 96 Query 33181 TTATTTTTCAATACCAGAAGCTTTTCAACTTCCAAATGCCACATAGGATAGTTAATA-TT 33239 |||||||| || || | | |||||| ||| |||||||| || ||||| ||| || Sbjct 97 TTATTTTTTAAAACTAATAAACTTTCAATTTCAAAATGCCATATTGGATAAAATATAGTT 156 Query 33240 ACCACTACCNNNNNGAACACCACCTTGGCTACAGCTCTTAACACCGGTAGTAAAATGTTT 33299 || || || ||| || ||||| |||| || ||| | | ||||||||| Sbjct 157 GCCGCT-CCACCTCTAACTCCTCCTTGAGAACAGGATTTTACAGCACTTTGAAAATGTTT 215 Query 33300 CCAGAATGGAATGACCCCAGTGTGGGAAACTTCCCCCGAGCGGATACGAGATCCTTCAGC 33359 | || ||||| ||||| || | |||| || | ||| || ||| | || Sbjct 216 ATAAAAAGGAATACAACCAGTATGAAATGCTTCGCCATTTCTAATAGGACTACCTACTGC 275 Query 33360 ACGAATAGCACCACCATTAATACCAATACCGGCACGGCGGGAAATATATTTCATTATCGC 33419 |||||| ||| ||||||||||||| || || || | |||| |||||| | || | Sbjct 276 ACGAATTTTTCCAGCATTAATACCAATTCCTGCTCGTTGAGAAACATATTTTACAATAGA 335 Query 33420 TTTTGATGTTTCTCCGATAGATTCAAGAGAGTCACCGGATTCAATTTTAACGCATGAGCT 33479 | | || | ||||| || ||| ||| | |||||||| ||| |||||||| Sbjct 336 ACTAGTAGTAGCGTTAATAGAATCTAGATTATCATCACATTCAATTAAAACACATGAGCT 395 Query 33480 AAATTGACGAGTTGGAGTTCTTACACCAGAAAGAATTGGTGTCGGTAGAGAAATTTCAAA 33539 |||||| ||||| |||||||| || ||||| | |||||||||||||| |||||||| || Sbjct 396 AAATTGTCGAGTAGGAGTTCTAACTCCAGACATAATTGGTGTCGGTAAAGAAATTTTGAA 455 Query 33540 ATTACTAGCGGCATTATAAAAA 33561 | | | ||||||||||||| Sbjct 456 AGTTGAAATGGCATTATAAAAA 477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750090836556320