Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_015252.1 Length=36953 Score E Sequences producing significant alignments: (Bits) Value seq260187 113 1e-20 >seq260187 Length=34880 Score = 113 bits (124), Expect = 1e-20 Identities = 216/313 (69%), Gaps = 4/313 (1%) Strand=Plus/Plus Query 32039 ATGATGAATCGAGTTGTTTTAGTGGGCCGTTTAACAAAGGACCCCGAATTGAAATATACA 32098 ||||| || || || |||||||| || || ||||| ||||| ||| || ||||| Sbjct 22172 ATGATTAACCGCGTCGTTTTAGTCGGTCGGTTAACTCGTGACCCTGAAATGCGTTATACG 22231 Query 32099 CCT-GCAGGAGCAGCAGTTGCCACATTTACACTAGCTGTAAATCGTACGTTTACGAATCA 32157 | || ||| || || | ||| ||||| ||| | ||| ||||||| || Sbjct 22232 CAGAGCGGGATT-GCGGTAACGCGATTCACACTCGCTTGTGACCGTCCGTTTACAGGACA 22290 Query 32158 GCAAGGTGAGCGTGAAGCTGATTACATTAACTGTGTCGTTTGGCGTAAGGCTGCCGAAAG 32217 | || |||| |||||||| | ||| | || ||||||||||| ||| || || | Sbjct 22291 AGATGGGAAGCGAGAAGCTGACTTCATCGATTGCGTCGTTTGGCGCAAGCAAGCAGAGAA 22350 Query 32218 CGTAGCTAACTACTTGAAAAAAGGAAGTTTAGCAGGTGTTGATGGTCGATTACAAACACG 32277 ||| ||| | || ||||||||||| || | ||||||||||| ||||| | || | | Sbjct 22351 CGTTGCTCAGTATTTGAAAAAAGGGAGCCTTGCAGGTGTTGAGGGTCGCCTTCAGATTAG 22410 Query 32278 TAACTATGAAGGCAATGACGGTAAGCGTGTATAT-GTGACAGAGGTCATTGCGGAAAGTG 32336 || |||||| | || || ||| | ||| ||| ||| |||| ||| | ||||| |||| Sbjct 22411 TAGCTATGACGATAAAGATGGTCAACGTCGTTATCGTG-CAGAAGTCGTCGCGGATAGTG 22469 Query 32337 TACAGTTCCTAGA 32349 | | |||||||| Sbjct 22470 TTCGATTCCTAGA 22482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117753140578440