Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_015252.1
Length=36953
Score E
Sequences producing significant alignments: (Bits) Value
seq260187 113 1e-20
>seq260187
Length=34880
Score = 113 bits (124), Expect = 1e-20
Identities = 216/313 (69%), Gaps = 4/313 (1%)
Strand=Plus/Plus
Query 32039 ATGATGAATCGAGTTGTTTTAGTGGGCCGTTTAACAAAGGACCCCGAATTGAAATATACA 32098
||||| || || || |||||||| || || ||||| ||||| ||| || |||||
Sbjct 22172 ATGATTAACCGCGTCGTTTTAGTCGGTCGGTTAACTCGTGACCCTGAAATGCGTTATACG 22231
Query 32099 CCT-GCAGGAGCAGCAGTTGCCACATTTACACTAGCTGTAAATCGTACGTTTACGAATCA 32157
| || ||| || || | ||| ||||| ||| | ||| ||||||| ||
Sbjct 22232 CAGAGCGGGATT-GCGGTAACGCGATTCACACTCGCTTGTGACCGTCCGTTTACAGGACA 22290
Query 32158 GCAAGGTGAGCGTGAAGCTGATTACATTAACTGTGTCGTTTGGCGTAAGGCTGCCGAAAG 32217
| || |||| |||||||| | ||| | || ||||||||||| ||| || || |
Sbjct 22291 AGATGGGAAGCGAGAAGCTGACTTCATCGATTGCGTCGTTTGGCGCAAGCAAGCAGAGAA 22350
Query 32218 CGTAGCTAACTACTTGAAAAAAGGAAGTTTAGCAGGTGTTGATGGTCGATTACAAACACG 32277
||| ||| | || ||||||||||| || | ||||||||||| ||||| | || | |
Sbjct 22351 CGTTGCTCAGTATTTGAAAAAAGGGAGCCTTGCAGGTGTTGAGGGTCGCCTTCAGATTAG 22410
Query 32278 TAACTATGAAGGCAATGACGGTAAGCGTGTATAT-GTGACAGAGGTCATTGCGGAAAGTG 32336
|| |||||| | || || ||| | ||| ||| ||| |||| ||| | ||||| ||||
Sbjct 22411 TAGCTATGACGATAAAGATGGTCAACGTCGTTATCGTG-CAGAAGTCGTCGCGGATAGTG 22469
Query 32337 TACAGTTCCTAGA 32349
| | ||||||||
Sbjct 22470 TTCGATTCCTAGA 22482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 117753140578440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |